RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MAP3K21Q5TCX8 1036 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 SAMD7Q7Z3H4 446 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 HEATR3Q7Z4Q2 680 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 RRP36Q96EU6 259 aaKnown RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 PNMA2Q9UL42 364 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 ODF2LQ9ULJ1 636 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 GOLGB1Q14789 3259 aaKnown RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 GNAT2P19087 354 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 BTDP43251 543 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 GSTA5Q7RTV2 222 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 CCDC186Q7Z3E2 898 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 CCDC144CPQ8IYA2 1237 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 REM2Q8IYK8 340 aaPredicted RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 VCX3AQ9NNX9 186 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 VPS18Q9P253 973 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 FBXL21Q9UKT6 434 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 CDC42BPGQ6DT37 1551 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 BIN1O00499 593 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 PRAMEF18Q5VWM3 479 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 NLRX1Q86UT6 975 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 SPATS2Q86XZ4 545 aaKnown RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 YAF2Q8IY57 180 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 AFAP1L1Q8TED9 768 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 LPIN2Q92539 896 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 ANO3Q9BYT9 981 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 PUF60Q9UHX1 559 aaKnown RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 FAM169AQ9Y6X4 670 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 ZNF853P0CG23 659 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 MARCKSP29966 332 aaPredicted RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 GYG1P46976 350 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 SEL1L2Q5TEA6 688 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 RGMBQ6NW40 437 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ZBTB12Q9Y330 459 aaPredicted RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 SECISBP2LQ93073 1101 aaKnown RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 NOC2LQ9Y3T9 749 aaKnown RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ABCC3O15438 1527 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ACTN4O43707 911 aaKnown RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 PPFIA4O75335 1185 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 CHRNDQ07001 517 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 TTC22Q5TAA0 569 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 EEPD1Q7L9B9 569 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ARHGAP45Q92619 1136 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ZSWIM4Q9H7M6 989 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ATP6V0A2Q9Y487 856 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 MROH2AA6NES4 1674 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 NCOA3Q9Y6Q9 1424 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 TESPA1A2RU30 521 aaPredicted RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 PHACTR2O75167 634 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 GAS8O95995 478 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 TMOD1P28289 359 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 PCK1P35558 622 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ANO6Q4KMQ2 910 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 TAOK1Q7L7X3 1001 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ZBTB38Q8NAP3 1195 aaPredicted RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 NEK11Q8NG66 645 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 NUF2Q9BZD4 464 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 RTL9Q8NET4 1388 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 VIMP08670 466 aaKnown RBP6.99□□□□□ -1.29
PTPN3-202ENST00000374541 GNAT1P11488 350 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 INF2Q27J81 1249 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 CCDC38Q502W7 563 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 ELMOD1Q8N336 334 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 EXOC4Q96A65 974 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 IQCDQ96DY2 449 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 RPS6KC1Q96S38 1066 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 PIK3C2BO00750 1634 aa6.99□□□□□ -1.29
PTPN3-202ENST00000374541 PARP1P09874 1014 aaKnown RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 ARL1P40616 181 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 ICA1Q05084 483 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 GCKRQ14397 625 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 UBE2OQ9C0C9 1292 aaKnown RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 SERPINA10Q9UK55 444 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 AGLP35573 1532 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 CFBP00751 764 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 NAPAP54920 295 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 MTMR3Q13615 1198 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 BRAPQ7Z569 592 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 SP8Q8IXZ3 490 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 GPC2Q8N158 579 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 C7orf31Q8N865 590 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 NCAPGQ9BPX3 1015 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 M0R2C6 588 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 INPP5BP32019 993 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 CLNS1AP54105 237 aaKnown RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 LINC00116Q8NCU8 138 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 ZNF594Q96JF6 807 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 TDRD3Q9H7E2 651 aaKnown RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 ZNF215Q9UL58 517 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 RTL1A6NKG5 1358 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 FCER1AP12319 257 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 HS2ST1Q7LGA3 356 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 ZNF784Q8NCA9 323 aaPredicted RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 CHAMP1Q96JM3 812 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 MMP19Q99542 508 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 TMX1Q9H3N1 280 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 HOXC10Q9NYD6 342 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
PTPN3-202ENST00000374541 PSMD14O00487 310 aa6.98□□□□□ -1.29
PTPN3-202ENST00000374541 DKC1O60832 514 aaKnown RBP eCLIP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms