RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 IGHA2P01877 340 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 CYBAP13498 195 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 VCAM1P19320 739 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 UBE3CQ15386 1083 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 ZMYM1Q5SVZ6 1142 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 GJC2Q5T442 439 aaPredicted RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 ZNF697Q5TEC3 545 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 FAM109BQ6ICB4 259 aaPredicted RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 CWC27Q6UX04 472 aaKnown RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 SH3RF1Q7Z6J0 888 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 CRACR2BQ8N4Y2 399 aaPredicted RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 MIGA1Q8NAN2 632 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 MAFAQ8NHW3 353 aaPredicted RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 ACER1Q8TDN7 264 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 MYLIPQ8WY64 445 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 BACH2Q9BYV9 841 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 TTYH1Q9H313 450 aaPredicted RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.94
SP140-202ENST00000373645 DDX20Q9UHI6 824 aaKnown RBP9.21□□□□□ -0.94
SP140-202ENST00000373645 SPDYE16A6NNV3 312 aaPredicted RBP9.2□□□□□ -0.94
SP140-202ENST00000373645 PDE6AP16499 860 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 CNGA1P29973 690 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 NMIQ13287 307 aaPredicted RBP9.2□□□□□ -0.94
SP140-202ENST00000373645 MCMDC2Q4G0Z9 681 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 TRMT44Q8IYL2 757 aaKnown RBP9.2□□□□□ -0.94
SP140-202ENST00000373645 MAGEB6Q8N7X4 407 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 APPBP2Q92624 585 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 C12orf42Q96LP6 360 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 FAM227BQ96M60 508 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 FEZ1Q99689 392 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 LBHD1Q9BQE6 289 aaPredicted RBP9.2□□□□□ -0.94
SP140-202ENST00000373645 ESYT1Q9BSJ8 1104 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 DHX36Q9H2U1 1008 aaKnown RBP9.2□□□□□ -0.94
SP140-202ENST00000373645 PRDM5Q9NQX1 630 aaPredicted RBP9.2□□□□□ -0.94
SP140-202ENST00000373645 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.2□□□□□ -0.94
SP140-202ENST00000373645 ATP11BQ9Y2G3 1177 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 RABGAP1Q9Y3P9 1069 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 MYH1P12882 1939 aa9.2□□□□□ -0.94
SP140-202ENST00000373645 TCRBV5S4A2TA0A5A2 114 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 TRIM43BA6NCK2 446 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 DNM1LO00429 736 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 SGSM2O43147 1006 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 CHGBP05060 677 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 CYP7A1P22680 504 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 PTPREP23469 700 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 ITGB8P26012 769 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 GUCY1A2P33402 732 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
SP140-202ENST00000373645 PPP4CP60510 307 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 GRB14Q14449 540 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 RAB3GAP1Q15042 981 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 TRIM60Q495X7 471 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 MFSD14CQ5VZR4 134 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 USP38Q8NB14 1042 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 LPAR1Q92633 364 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 BADQ92934 168 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 TRIM43Q96BQ3 446 aaPredicted RBP9.19□□□□□ -0.94
SP140-202ENST00000373645 NOL10Q9BSC4 688 aaKnown RBP9.19□□□□□ -0.94
SP140-202ENST00000373645 TRIM34Q9BYJ4 488 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 SEMA6BQ9H3T3 888 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 CWC22Q9HCG8 908 aaKnown RBP9.19□□□□□ -0.94
SP140-202ENST00000373645 PDLIM7Q9NR12 457 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 RAD50Q92878 1312 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 ZNF532Q9HCE3 1301 aa9.19□□□□□ -0.94
SP140-202ENST00000373645 MUC3AQ02505 3323 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 A0A0D9SFI3 127 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 SLC15A5A6NIM6 579 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 COBLO75128 1261 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 REC8O95072 547 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 BAG3O95817 575 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 HOXC6P09630 235 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 EPHB4P54760 987 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 EMP3P54852 163 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 ATP2B2Q01814 1243 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 SLFNL1Q499Z3 407 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 FAM47AQ5JRC9 791 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 KIAA1755Q5JYT7 1200 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 PRAMEF19Q5SWL8 479 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 CATSPERGQ6ZRH7 1159 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 CLEC10AQ8IUN9 316 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 FOXP4Q8IVH2 680 aaPredicted RBP9.18□□□□□ -0.94
SP140-202ENST00000373645 GTF3C2Q8WUA4 911 aaPredicted RBP9.18□□□□□ -0.94
SP140-202ENST00000373645 FERMT2Q96AC1 680 aa9.18□□□□□ -0.94
SP140-202ENST00000373645 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
SP140-202ENST00000373645 PUS7LQ9H0K6 701 aaKnown RBP9.18□□□□□ -0.94
SP140-202ENST00000373645 RPAP3Q9H6T3 665 aaPredicted RBP9.18□□□□□ -0.94
SP140-202ENST00000373645 ZNF236Q9UL36 1845 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms