RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 MTRQ99707 1265 aa14.25□□□□□ -0.13
TSPAN6-201ENST00000373020 MCM9Q9NXL9 1143 aa14.25□□□□□ -0.13
TSPAN6-201ENST00000373020 PRDM4Q9UKN5 801 aa14.25□□□□□ -0.13
TSPAN6-201ENST00000373020 ITIH6Q6UXX5 1313 aa14.24□□□□□ -0.13
TSPAN6-201ENST00000373020 AKR1B15C9JRZ8 316 aaPredicted RBP14.24□□□□□ -0.13
TSPAN6-201ENST00000373020 TADA3O75528 432 aa14.24□□□□□ -0.13
TSPAN6-201ENST00000373020 BLIDQ8IZY5 108 aa14.24□□□□□ -0.13
TSPAN6-201ENST00000373020 DAGLBQ8NCG7 672 aa14.24□□□□□ -0.13
TSPAN6-201ENST00000373020 GTPBP4Q9BZE4 634 aaKnown RBP14.24□□□□□ -0.13
TSPAN6-201ENST00000373020 KAT14Q9H8E8 782 aa14.24□□□□□ -0.13
TSPAN6-201ENST00000373020 GNPATO15228 680 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 ZPR1O75312 459 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 LONP1P36776 959 aaKnown RBP14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 STX17P56962 302 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 KLHL10Q6JEL2 608 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 AMIGO3Q86WK7 504 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 SMYD4Q8IYR2 804 aaPredicted RBP14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 PNMA1Q8ND90 353 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 WDR66Q8TBY9 1149 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 KIFC2Q96AC6 838 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 NAA15Q9BXJ9 866 aaKnown RBP14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 TCP11L1Q9NUJ3 509 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 PCDHA4Q9UN74 947 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 MCM7P33993 719 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 PPP4CP60510 307 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 TFAP4Q01664 338 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 SLC35G1Q2M3R5 365 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 CCDC178Q5BJE1 867 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 ZNF446Q9NWS9 450 aa14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 LIMA1Q9UHB6 759 aaKnown RBP14.23□□□□□ -0.13
TSPAN6-201ENST00000373020 MFAP3LO75121 409 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 TYW1BQ6NUM6 668 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 C15orf52Q6ZUT6 534 aaKnown RBP14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 IGSF22Q8N9C0 903 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 WDR24Q96S15 920 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 MAD2L2Q9UI95 211 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 RWDD2AQ9UIY3 292 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 CTNND2Q9UQB3 1225 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 LEMD3Q9Y2U8 911 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 LRRC10BA6NIK2 292 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 LDHBP07195 334 aaKnown RBP14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 GNAQP50148 359 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 STAG2Q8N3U4 1231 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 CCDC24Q8N4L8 307 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 JAG2Q9Y219 1238 aa14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 RTCBQ9Y3I0 505 aaKnown RBP14.22□□□□□ -0.13
TSPAN6-201ENST00000373020 EFCAB8A8MWE9 144 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 URI1O94763 535 aaPredicted RBP14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 MAP3K9P80192 1104 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 RBL2Q08999 1139 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 GRAPQ13588 217 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 ZNF658Q5TYW1 1059 aaPredicted RBP14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 GALNT17Q6IS24 598 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 GRAPLQ8TC17 118 aaPredicted RBP14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 SH3RF3Q8TEJ3 882 aaPredicted RBP14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 STAMQ92783 540 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 ARHGEF1Q92888 912 aaKnown RBP14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 GPKOWQ92917 476 aaPredicted RBP eCLIP14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 CCDC51Q96ER9 411 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 DYNLL2Q96FJ2 89 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 BLZF1Q9H2G9 400 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 MRPL44Q9H9J2 332 aaKnown RBP14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 MRFAP1Q9Y605 127 aa14.21□□□□□ -0.13
TSPAN6-201ENST00000373020 MYH1P12882 1939 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 CCDC175P0C221 793 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 GNG11P61952 73 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 GSTO1P78417 241 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 SPAG1Q07617 926 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 PAK1Q13153 545 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 MTF1Q14872 753 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 FILIP1LQ4L180 1135 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 ARHGAP29Q52LW3 1261 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 KRT222Q8N1A0 295 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 DESI2Q9BSY9 194 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 RMND1Q9NWS8 449 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.14
TSPAN6-201ENST00000373020 SOWAHDA6NJG2 315 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 GYPCP04921 128 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 USP5P45974 858 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 CLCN6P51797 869 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 KRT31Q15323 416 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 WWC2Q6AWC2 1192 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 RAD9BQ6WBX8 426 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 PPFIBP1Q86W92 1011 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 MNS1Q8NEH6 495 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 CCDC148Q8NFR7 591 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 CARD6Q9BX69 1037 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 DISC1Q9NRI5 854 aa14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 CCNL1Q9UK58 526 aaPredicted RBP14.2□□□□□ -0.14
TSPAN6-201ENST00000373020 CYTH3O43739 400 aa14.19□□□□□ -0.14
TSPAN6-201ENST00000373020 RPN1P04843 607 aaKnown RBP14.19□□□□□ -0.14
TSPAN6-201ENST00000373020 CASQ1P31415 396 aa14.19□□□□□ -0.14
TSPAN6-201ENST00000373020 TXLNAP40222 546 aa14.19□□□□□ -0.14
TSPAN6-201ENST00000373020 GRIK5Q16478 980 aa14.19□□□□□ -0.14
TSPAN6-201ENST00000373020 NAALADL2Q58DX5 795 aa14.19□□□□□ -0.14
TSPAN6-201ENST00000373020 RRAGBQ5VZM2 374 aa14.19□□□□□ -0.14
TSPAN6-201ENST00000373020 SLC51AQ86UW1 340 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms