RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 NTRK3Q16288 839 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 PTPROQ16827 1216 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NBPF20Q3BBV1 942 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NBPF14Q5TI25 921 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NBPF10Q6P3W6 841 aaKnown RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NBPF15Q8N660 670 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 KRI1Q8N9T8 703 aaKnown RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 MSANTD4Q8NCY6 345 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 NCOA7Q8NI08 942 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 AFAP1L1Q8TED9 768 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 FAM89AQ96GI7 184 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 LACRTQ9GZZ8 138 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 FAM107BQ9H098 131 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 CD248Q9HCU0 757 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 GNL3LQ9NVN8 582 aaKnown RBP6.13□□□□□ -1.43
ATG4A-204ENST00000372246 MYO6Q9UM54 1294 aa6.13□□□□□ -1.43
ATG4A-204ENST00000372246 ESYT3A0FGR9 886 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 SOWAHBA6NEL2 793 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 GCP02774 474 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 BCAMP50895 628 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 PMS1P54277 932 aaKnown RBP6.12□□□□□ -1.43
ATG4A-204ENST00000372246 RNASE9P60153 205 aaKnown RBP6.12□□□□□ -1.43
ATG4A-204ENST00000372246 PDCLQ13371 301 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 ZNF174Q15697 407 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 CHRNA2Q15822 529 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 ATL3Q6DD88 541 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 KRT26Q7Z3Y9 468 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 ANKRD13CQ8N6S4 541 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 ANKK1Q8NFD2 765 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 NAPGQ99747 312 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-204ENST00000372246 CARD10Q9BWT7 1032 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 PIH1D3Q9NQM4 214 aaKnown RBP6.12□□□□□ -1.43
ATG4A-204ENST00000372246 PSD3Q9NYI0 1048 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 ADD3Q9UEY8 706 aaKnown RBP6.12□□□□□ -1.43
ATG4A-204ENST00000372246 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-204ENST00000372246 GDAQ9Y2T3 454 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 CDHR2Q9BYE9 1310 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 SYNRGQ9UMZ2 1314 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 TECPR2O15040 1411 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 TSPOAP1O95153 1857 aa6.12□□□□□ -1.43
ATG4A-204ENST00000372246 FRMD3A2A2Y4 597 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 N4BP3O15049 544 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ZEB2O60315 1214 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 EIF3JO75822 258 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 PLEKP08567 350 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 KRT9P35527 623 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 MCAMP43121 646 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 USP5P45974 858 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 SARSP49591 514 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 MNAT1P51948 309 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 AMPD2Q01433 879 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 KRT31Q15323 416 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 TRADDQ15628 312 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 HLFQ16534 295 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 RABL6Q3YEC7 729 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 TMEM67Q5HYA8 995 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 CTR9Q6PD62 1173 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 PADI6Q6TGC4 694 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 FCHSD1Q86WN1 690 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 NOSTRINQ8IVI9 506 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 IQUBQ8NA54 791 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 TSEN2Q8NCE0 465 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 SMARCC1Q92922 1105 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 TATDN2Q93075 761 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 BABAM1Q9NWV8 329 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ZSWIM5Q9P217 1185 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 DMGDHQ9UI17 866 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 HOOK1Q9UJC3 728 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ANGEL1Q9UNK9 670 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 FAM169AQ9Y6X4 670 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 NWD2Q9ULI1 1742 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ZMYM6O95789 1325 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 WTIPA6NIX2 430 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 SH2B2O14492 632 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ZBTB43O43298 467 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 NCK2O43639 380 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 KRT14P02533 472 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 SSBP05455 408 aaKnown RBP eCLIP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 IVLP07476 585 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 HNRNPH1P31943 449 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 IRAK1P51617 712 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 HERVK_113P62684 666 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 TCIRG1Q13488 830 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 STIM1Q13586 685 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 CUL4BQ13620 913 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 CPLX2Q6PUV4 134 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 RASGRP2Q7LDG7 609 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 TADA2BQ86TJ2 420 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 NUTM2AQ8IVF1 878 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ENOX1Q8TC92 643 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 BCAS4Q8TDM0 211 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 SYMPKQ92797 1274 aaKnown RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 AIDAQ96BJ3 306 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 MTRQ99707 1265 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 JPH2Q9BR39 696 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-204ENST00000372246 SELENOOQ9BVL4 669 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 LY9Q9HBG7 655 aa6.11□□□□□ -1.43
ATG4A-204ENST00000372246 ABHD10Q9NUJ1 306 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms