RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 MFAP3LO75121 409 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 MOCS3O95396 460 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 RRAGAQ7L523 313 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTPN1-201ENST00000371621 LRWD1Q9UFC0 647 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 HYOU1Q9Y4L1 999 aa13.04□□□□□ -0.32
PTPN1-201ENST00000371621 ASIC1P78348 528 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 MFSD4BQ5TF39 518 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 OR2W6PQ8NHA6 318 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
PTPN1-201ENST00000371621 MCUR1Q96AQ8 359 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 TAF5LO75529 589 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 BAG2O95816 211 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 IL13P35225 146 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 SMTNP53814 917 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 SLC39A14Q15043 492 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 C6orf163Q5TEZ5 329 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 TMCO4Q5TGY1 634 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 ALS2CLQ60I27 953 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 PROCA1Q8NCQ7 364 aaPredicted RBP13.03□□□□□ -0.32
PTPN1-201ENST00000371621 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 PAPOLBQ9NRJ5 636 aaKnown RBP13.03□□□□□ -0.32
PTPN1-201ENST00000371621 CNNM1Q9NRU3 951 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 SCOCQ9UIL1 159 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 ZNF518AQ6AHZ1 1483 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
PTPN1-201ENST00000371621 CTCFP49711 727 aaPredicted RBP13.03□□□□□ -0.32
PTPN1-201ENST00000371621 CCNI2Q6ZMN8 369 aaPredicted RBP13.03□□□□□ -0.32
PTPN1-201ENST00000371621 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 CCDC51Q96ER9 411 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 TAOK3Q9H2K8 898 aa13.03□□□□□ -0.32
PTPN1-201ENST00000371621 GRM8O00222 908 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 MAGOHP61326 146 aaKnown RBP13.02□□□□□ -0.32
PTPN1-201ENST00000371621 RASSF7Q02833 373 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 RAPGEF1Q13905 1077 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 CFAP157Q5JU67 520 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 MAGOHBQ96A72 148 aaKnown RBP13.02□□□□□ -0.32
PTPN1-201ENST00000371621 PANX2Q96RD6 677 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 OSBPL9Q96SU4 736 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 PAG1Q9NWQ8 432 aa13.02□□□□□ -0.32
PTPN1-201ENST00000371621 B4E1Z4 1266 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 TCP1P17987 556 aaKnown RBP13.02□□□□□ -0.33
PTPN1-201ENST00000371621 ZNF449Q6P9G9 518 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 TSGA10Q9BZW7 698 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 ZNF711Q9Y462 761 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 FTCDO95954 541 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 HNRNPCP07910 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
PTPN1-201ENST00000371621 SLC8A3P57103 927 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 CUL3Q13618 768 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 TRIM14Q14142 442 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 PDCD2Q16342 344 aaPredicted RBP13.02□□□□□ -0.33
PTPN1-201ENST00000371621 TOM1L2Q6ZVM7 507 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 ZC3H18Q86VM9 953 aaKnown RBP13.02□□□□□ -0.33
PTPN1-201ENST00000371621 VPS52Q8N1B4 723 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 NFATC2IPQ8NCF5 419 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 DYDC2Q96IM9 177 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 BATF3Q9NR55 127 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 KLHL14Q9P2G3 628 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 MYO1AQ9UBC5 1043 aa13.02□□□□□ -0.33
PTPN1-201ENST00000371621 TMEM110-MUSTN1A8MSY1 372 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 MYBL2P10244 700 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 KCNJ6P48051 423 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 VPS41P49754 854 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 PLCD1P51178 756 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 IDI1Q13907 227 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 LLGL1Q15334 1064 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 RAB3IL1Q8TBN0 382 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 WHAMMQ8TF30 809 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 EXOC1Q9NV70 894 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 GIGYF1O75420 1035 aaPredicted RBP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 PSMC4P43686 418 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 COPB1P53618 953 aaKnown RBP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 SLC4A8Q2Y0W8 1093 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 NFRKBQ6P4R8 1299 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 EMBQ6PCB8 327 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 CYFIP2Q96F07 1278 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 RMND1Q9NWS8 449 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 NCK2O43639 380 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 MDH1P40925 334 aaKnown RBP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 FXR1P51114 621 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 DEUP1Q05D60 604 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 MORC3Q14149 939 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 SNRNP27Q8WVK2 155 aaKnown RBP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 CUL5Q93034 780 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 NLRP2Q9NX02 1062 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 CHCHD3Q9NX63 227 aaKnown RBP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 NKIRAS1Q9NYS0 192 aa13.01□□□□□ -0.33
PTPN1-201ENST00000371621 UTP11Q9Y3A2 253 aaKnown RBP13.01□□□□□ -0.33
PTPN1-201ENST00000371621 SYNMO15061 1565 aa13□□□□□ -0.33
PTPN1-201ENST00000371621 RASSF10A6NK89 507 aa13□□□□□ -0.33
PTPN1-201ENST00000371621 OPLAHO14841 1288 aa13□□□□□ -0.33
PTPN1-201ENST00000371621 MAP7Q14244 749 aa13□□□□□ -0.33
PTPN1-201ENST00000371621 KIAA0825Q8IV33 1275 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms