RNA–Protein interactions for RNA: ENST00000371539.7

SALL4-202, Transcript of spalt like transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene SALL4, Length 1,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4-202ENST00000371539 LBHD1Q9BQE6 289 aaPredicted RBP12.64□□□□□ -0.39
SALL4-202ENST00000371539 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
SALL4-202ENST00000371539 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
SALL4-202ENST00000371539 ATP11BQ9Y2G3 1177 aa12.64□□□□□ -0.39
SALL4-202ENST00000371539 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
SALL4-202ENST00000371539 VCANP13611 3396 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 CDH23Q9H251 3354 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 MYH8P13535 1937 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 EEF2P13639 858 aaKnown RBP12.63□□□□□ -0.39
SALL4-202ENST00000371539 PLS1Q14651 629 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 LRRC41Q15345 812 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 TRIM60Q495X7 471 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 C1orf53Q5VUE5 145 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 RIOX2Q8IUF8 465 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 PDLIM7Q9NR12 457 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 ZNF214Q9UL59 606 aaPredicted RBP12.63□□□□□ -0.39
SALL4-202ENST00000371539 DDX19BQ9UMR2 479 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 ROBO3Q96MS0 1386 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 PRUNE2Q8WUY3 3088 aa12.63□□□□□ -0.39
SALL4-202ENST00000371539 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
SALL4-202ENST00000371539 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 SLC25A27O95847 323 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 MS4A1P11836 297 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 FCER1AP12319 257 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 ADCYAP1R1P41586 468 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 SHHQ15465 462 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 ZNF792Q3KQV3 632 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 C9orf50Q5SZB4 431 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 CTR9Q6PD62 1173 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
SALL4-202ENST00000371539 PUS7LQ9H0K6 701 aaKnown RBP12.62□□□□□ -0.39
SALL4-202ENST00000371539 KANSL2Q9H9L4 492 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 SLC5A4Q9NY91 659 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 NRBP1Q9UHY1 535 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
SALL4-202ENST00000371539 COL11A1P12107 1806 aaPredicted RBP12.62□□□□□ -0.39
SALL4-202ENST00000371539 TRIM43BA6NCK2 446 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 VWA5AO00534 786 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 PGK2P07205 417 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 ZNF865P0CJ78 1059 aaPredicted RBP12.61□□□□□ -0.39
SALL4-202ENST00000371539 TAL1P17542 331 aaPredicted RBP12.61□□□□□ -0.39
SALL4-202ENST00000371539 BADQ92934 168 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 FERMT2Q96AC1 680 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 TRIM43Q96BQ3 446 aaPredicted RBP12.61□□□□□ -0.39
SALL4-202ENST00000371539 TINF2Q9BSI4 451 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 BCL11AQ9H165 835 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 PRKAG2Q9UGJ0 569 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 PHF24Q9UPV7 400 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 SMCHD1A6NHR9 2005 aa12.61□□□□□ -0.39
SALL4-202ENST00000371539 MYH7P12883 1935 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 ZNFX1Q9P2E3 1918 aaKnown RBP12.6□□□□□ -0.39
SALL4-202ENST00000371539 ITGB8P26012 769 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 STAT3P40763 770 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 TLE2Q04725 743 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 FAM83BQ5T0W9 1011 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
SALL4-202ENST00000371539 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 STRBPQ96SI9 672 aaKnown RBP12.6□□□□□ -0.39
SALL4-202ENST00000371539 MMP19Q99542 508 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 XPNPEP3Q9NQH7 507 aa12.6□□□□□ -0.39
SALL4-202ENST00000371539 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
SALL4-202ENST00000371539 DIS3Q9Y2L1 958 aaKnown RBP12.6□□□□□ -0.39
SALL4-202ENST00000371539 SPTBN5Q9NRC6 3674 aaKnown RBP12.59□□□□□ -0.39
SALL4-202ENST00000371539 ADAMTS4O75173 837 aa12.59□□□□□ -0.39
SALL4-202ENST00000371539 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
SALL4-202ENST00000371539 RASA1P20936 1047 aa12.59□□□□□ -0.39
SALL4-202ENST00000371539 SBK1Q52WX2 424 aa12.59□□□□□ -0.39
SALL4-202ENST00000371539 AMOTL1Q8IY63 956 aa12.59□□□□□ -0.39
SALL4-202ENST00000371539 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
SALL4-202ENST00000371539 NUP88Q99567 741 aaPredicted RBP12.59□□□□□ -0.39
SALL4-202ENST00000371539 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
SALL4-202ENST00000371539 ARPP21Q9UBL0 812 aaPredicted RBP12.59□□□□□ -0.39
SALL4-202ENST00000371539 DNAJC25-GNG10A0A024R161 153 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 GSG1L2A8MUP6 293 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 SMARCA5O60264 1052 aaPredicted RBP12.58□□□□□ -0.4
SALL4-202ENST00000371539 PGK1P00558 417 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 RARBP10826 455 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 EPHB4P54760 987 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 KCTD2Q14681 263 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 ZNF697Q5TEC3 545 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
SALL4-202ENST00000371539 COL25A1Q9BXS0 654 aaPredicted RBP12.58□□□□□ -0.4
SALL4-202ENST00000371539 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
SALL4-202ENST00000371539 EPB41L4AQ9HCS5 686 aaPredicted RBP12.58□□□□□ -0.4
SALL4-202ENST00000371539 NYAP2Q9P242 653 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 RIPK3Q9Y572 518 aa12.58□□□□□ -0.4
SALL4-202ENST00000371539 PLXNA1Q9UIW2 1896 aa12.57□□□□□ -0.4
SALL4-202ENST00000371539 A0A1W2PQ45 241 aaPredicted RBP12.57□□□□□ -0.4
SALL4-202ENST00000371539 A0A1W2PQY0 241 aa12.57□□□□□ -0.4
SALL4-202ENST00000371539 F5H6K3 240 aa12.57□□□□□ -0.4
SALL4-202ENST00000371539 KIAA0355O15063 1070 aa12.57□□□□□ -0.4
SALL4-202ENST00000371539 SNAI1O95863 264 aaPredicted RBP12.57□□□□□ -0.4
SALL4-202ENST00000371539 NDUFB10O96000 172 aa12.57□□□□□ -0.4
SALL4-202ENST00000371539 AKR1A1P14550 325 aa12.57□□□□□ -0.4
SALL4-202ENST00000371539 COPB2P35606 906 aa12.57□□□□□ -0.4
SALL4-202ENST00000371539 SMAD3P84022 425 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms