RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
NDC1-201ENST00000371429 TPCN1Q9ULQ1 816 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 BTBD18B2RXH4 712 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 H7C1W4 665 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 MAP4K1Q92918 833 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 ASIC2Q16515 512 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 JCADQ9P266 1359 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 ERICH4A6NGS2 130 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 IREB2P48200 963 aaKnown RBP16.37■□□□□ 0.21
NDC1-201ENST00000371429 TERF1P54274 439 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 SEL1L2Q5TEA6 688 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 GPR101Q96P66 508 aaPredicted RBP16.37■□□□□ 0.21
NDC1-201ENST00000371429 TXNDC16Q9P2K2 825 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 AGTPBP1Q9UPW5 1226 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 ADCY9O60503 1353 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 XRCC6P12956 609 aaKnown RBP eCLIP16.37■□□□□ 0.21
NDC1-201ENST00000371429 SERTAD1Q9UHV2 236 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 SLC27A3Q5K4L6 730 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 LCORLQ8N3X6 602 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 ADPGKQ9BRR6 497 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
NDC1-201ENST00000371429 ABT1Q9ULW3 272 aaKnown RBP16.37■□□□□ 0.21
NDC1-201ENST00000371429 PRKAB2O43741 272 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 USP17L8P0C7I0 530 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 TMOD1P28289 359 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 PPP1R7Q15435 360 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 TXNRD1Q16881 649 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 KCTD1Q719H9 257 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 PROCA1Q8NCQ7 364 aaPredicted RBP16.36■□□□□ 0.21
NDC1-201ENST00000371429 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 OVOS2A0A0G2JMS6 1433 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 NRBP2Q9NSY0 501 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 LARSQ9P2J5 1176 aaKnown RBP16.36■□□□□ 0.21
NDC1-201ENST00000371429 BMP3P12645 472 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 PDIA3P30101 505 aaKnown RBP16.36■□□□□ 0.21
NDC1-201ENST00000371429 NLRP12P59046 1061 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 RASGRF1Q13972 1273 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
NDC1-201ENST00000371429 CCDC114Q96M63 670 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 NUP58Q9BVL2 599 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 TAB2Q9NYJ8 693 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 BCRP11274 1271 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 FANCCQ00597 558 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 SRRTQ9BXP5 876 aaKnown RBP16.36■□□□□ 0.21
NDC1-201ENST00000371429 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
NDC1-201ENST00000371429 DAPK3O43293 454 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
NDC1-201ENST00000371429 SLC9C1Q4G0N8 1177 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 CCDC84Q86UT8 332 aaPredicted RBP16.35■□□□□ 0.21
NDC1-201ENST00000371429 ADD3Q9UEY8 706 aaKnown RBP16.35■□□□□ 0.21
NDC1-201ENST00000371429 COL15A1P39059 1388 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 KCNQ2O43526 872 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 P4HA1P13674 534 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 LIG4P49917 911 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 CALCOCO2Q13137 446 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 M0R2C6 588 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 CYP21A2P08686 494 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 MECOMQ03112 1051 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 ADALQ6DHV7 355 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 DCUN1D2Q6PH85 259 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 ARFGAP3Q9NP61 516 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 FAM169AQ9Y6X4 670 aa16.35■□□□□ 0.21
NDC1-201ENST00000371429 TNNC1P63316 161 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 SLC10A4Q96EP9 437 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 H0YCG3 227 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 CYP2J2P51589 502 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 IGBP1P78318 339 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 FAM160B1Q5W0V3 765 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 PODXL2Q9NZ53 605 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 ADCY10Q96PN6 1610 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
NDC1-201ENST00000371429 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 LSG1Q9H089 658 aaKnown RBP16.34■□□□□ 0.21
NDC1-201ENST00000371429 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
NDC1-201ENST00000371429 CYP4A11Q02928 519 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 CCDC14Q49A88 953 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 MYOCDQ8IZQ8 938 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 KIAA1524Q8TCG1 905 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 USP28Q96RU2 1077 aa16.34■□□□□ 0.21
NDC1-201ENST00000371429 PUS7LQ9H0K6 701 aaKnown RBP16.34■□□□□ 0.21
NDC1-201ENST00000371429 NR1I2O75469 434 aa16.33■□□□□ 0.21
NDC1-201ENST00000371429 SLC16A2P36021 539 aa16.33■□□□□ 0.21
NDC1-201ENST00000371429 POLGP54098 1239 aaPredicted RBP16.33■□□□□ 0.21
NDC1-201ENST00000371429 PAIP2Q9BPZ3 127 aaKnown RBP16.33■□□□□ 0.21
NDC1-201ENST00000371429 OSBPL3Q9H4L5 887 aa16.33■□□□□ 0.21
NDC1-201ENST00000371429 WDR70Q9NW82 654 aa16.33■□□□□ 0.21
NDC1-201ENST00000371429 MTRF1LQ9UGC7 380 aaKnown RBP16.33■□□□□ 0.21
NDC1-201ENST00000371429 ZKSCAN5Q9Y2L8 839 aa16.33■□□□□ 0.21
NDC1-201ENST00000371429 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.21
NDC1-201ENST00000371429 BMS1Q14692 1282 aaKnown RBP16.33■□□□□ 0.21
NDC1-201ENST00000371429 SPECC1LQ69YQ0 1117 aa16.33■□□□□ 0.21
NDC1-201ENST00000371429 CSRNP2Q9H175 543 aa16.33■□□□□ 0.21
NDC1-201ENST00000371429 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms