RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 TIMM10P62072 90 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 ELF3P78545 371 aaPredicted RBP10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 ZC3H12AQ5D1E8 599 aaKnown RBP10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 MICALCLQ6ZW33 695 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 KRT26Q7Z3Y9 468 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 IFT81Q8WYA0 676 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 ZNF570Q96NI8 536 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 HAUS7Q99871 368 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 PAGR1Q9BTK6 254 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 BLZF1Q9H2G9 400 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 MLXIPQ9HAP2 919 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 SPATS2LQ9NUQ6 558 aaKnown RBP10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 VPS54Q9P1Q0 977 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 TMEM131LA2VDJ0 1609 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 KDRP35968 1356 aa10.54□□□□□ -0.72
HMGCLL1-204ENST00000370852 OVOS2A0A0J9YW53 1432 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 OVOS2Q6IE36 1432 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 RANBP6O60518 1105 aaKnown RBP10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 RAPGEF3O95398 923 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 FAM107AO95990 144 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 PSMD2Q13200 908 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 CMTR1Q8N1G2 835 aaKnown RBP10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 OSBP2Q969R2 916 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 NLRP3Q96P20 1036 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 CSRNP2Q9H175 543 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 CAPN6Q9Y6Q1 641 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 KDM6AO15550 1401 aaPredicted RBP10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 PHF20L1A8MW92 1017 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 DNA2P51530 1060 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 NR5A1Q13285 461 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 SLC39A6Q13433 755 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 CCDC181Q5TID7 509 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 KSR2Q6VAB6 950 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 KIAA1328Q86T90 577 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 IQCKQ8N0W5 287 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 C3orf20Q8ND61 904 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 SPATA4Q8NEY3 305 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 SH3GL3Q99963 347 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 FAM167BQ9BTA0 163 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 CPSF2Q9P2I0 782 aaKnown RBP10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 DBF4Q9UBU7 674 aaPredicted RBP10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 METP08581 1390 aa10.53□□□□□ -0.72
HMGCLL1-204ENST00000370852 DCDC2CA8MYV0 355 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 PES1O00541 588 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 MGRN1O60291 552 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 BUB1BO60566 1050 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 ANP32DO95626 131 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 PLEKP08567 350 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 CALRP27797 417 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 COPB1P53618 953 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 UBXN1Q04323 297 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 PTPN12Q05209 780 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 ITGB3BPQ13352 177 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 PLCB4Q15147 1175 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 HLFQ16534 295 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 HIBCHQ6NVY1 386 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 MICU3Q86XE3 530 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 MB21D2Q8IYB1 491 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 TCP11Q8WWU5 503 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 SEC16BQ96JE7 1060 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 DSCC1Q9BVC3 393 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 RBM12Q9NTZ6 932 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 AGPAT5Q9NUQ2 364 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 CNOT8Q9UFF9 292 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 TRPC6Q9Y210 931 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 CHD1O14646 1710 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 NWD2Q9ULI1 1742 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 ZNF263O14978 683 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 NKRFO15226 690 aaKnown RBP eCLIP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 LGR5O75473 907 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 ERCC5P28715 1186 aaPredicted RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 RAB27AP51159 221 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 CKAP4Q07065 602 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 FILIP1LQ4L180 1135 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 MIS18BP1Q6P0N0 1132 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 NBPF10Q6P3W6 841 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 MPRIPQ6WCQ1 1025 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 CYB5R4Q7L1T6 521 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 MAB21L3Q8N8X9 362 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 HAUS4Q9H6D7 363 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 PAG1Q9NWQ8 432 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 G3BP2Q9UN86 482 aaKnown RBP10.52□□□□□ -0.73
HMGCLL1-204ENST00000370852 RIMBP3CA6NJZ7 1639 aa10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 RIMBP3BA6NNM3 1639 aa10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 RIMBP3Q9UFD9 1639 aa10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 ARAP3Q8WWN8 1544 aa10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 WNT7AO00755 349 aa10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 SNUPNO95149 360 aaKnown RBP10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 MOCS3O95396 460 aa10.51□□□□□ -0.73
HMGCLL1-204ENST00000370852 PYGLP06737 847 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms