RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SYMPKQ92797 1274 aaKnown RBP18.94■□□□□ 0.62
PTP4A1-201ENST00000370651 PDLIM2Q96JY6 352 aa18.94■□□□□ 0.62
PTP4A1-201ENST00000370651 ADGBQ8N7X0 1667 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 NOL3O60936 208 aaKnown RBP18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 VPS52Q8N1B4 723 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 RNF10Q8N5U6 811 aaKnown RBP18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 TACO1Q9BSH4 297 aaKnown RBP18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 DBNLQ9UJU6 430 aaKnown RBP18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 STK24Q9Y6E0 443 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 ENC1O14682 589 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 EXOC3O60645 756 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 PDE6AP16499 860 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 ZNF589Q86UQ0 364 aaPredicted RBP18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 MYOCDQ8IZQ8 938 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 U2AF1L4Q8WU68 220 aaKnown RBP18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 HINFPQ9BQA5 517 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 STK38LQ9Y2H1 464 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 GAS8O95995 478 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 EFCAB13Q8IY85 973 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 VCX3BQ9H321 246 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 RIPOR2Q9Y4F9 1068 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 ARHGEF35A5YM69 484 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 TERF2Q15554 542 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 CCDC14Q49A88 953 aa18.93■□□□□ 0.62
PTP4A1-201ENST00000370651 HSPA1LP34931 641 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 STAT1P42224 750 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 RASSF2P50749 326 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 FAM47AQ5JRC9 791 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 WDR66Q8TBY9 1149 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 NT5C3AQ9H0P0 336 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 C19orf44Q9H6X5 657 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 FAM184BQ9ULE4 1060 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 GCNT3O95395 438 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 PNMA6AP0CW24 399 aaPredicted RBP18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 SLC8A1P32418 973 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 ARL1P40616 181 aaPredicted RBP18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 SMTNP53814 917 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 GUCY2DQ02846 1103 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 RBL2Q08999 1139 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 TLR7Q9NYK1 1049 aaKnown RBP18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 PKD2L1Q9P0L9 805 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 TNKSO95271 1327 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 RESTQ13127 1097 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 PTPN21Q16825 1174 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 KCTD16Q68DU8 428 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.92■□□□□ 0.621e-12■■□□□ 12.2
PTP4A1-201ENST00000370651 ZNF853P0CG23 659 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 OGFOD1Q8N543 542 aa18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 ZSCAN10Q96SZ4 725 aaPredicted RBP18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 MRPL44Q9H9J2 332 aaKnown RBP18.92■□□□□ 0.62
PTP4A1-201ENST00000370651 PTGDRQ13258 359 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 ZMYM1Q5SVZ6 1142 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 TTC19Q6DKK2 380 aaPredicted RBP18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 VSTM4Q8IW00 320 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 CCDC170Q8IYT3 715 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 ANKRD13CQ8N6S4 541 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 KLHL14Q9P2G3 628 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 SAMD9Q5K651 1589 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 CCDC169A6NNP5 214 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 MYCT1Q8N699 235 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 RAB3IL1Q8TBN0 382 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 ANKRD20A3Q5VUR7 823 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 MAIP1Q8WWC4 291 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 KDM6BO15054 1643 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 SMCO2A6NFE2 343 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 XRCC5P13010 732 aaKnown RBP18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 IRX5P78411 483 aaPredicted RBP18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 DPH5Q9H2P9 285 aa18.91■□□□□ 0.62
PTP4A1-201ENST00000370651 BACH1O14867 736 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 HIP1RO75146 1068 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 ARHGAP44Q17R89 818 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 MED23Q9ULK4 1368 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 KIF23Q02241 960 aaPredicted RBP18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 ABCB4P21439 1286 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 TCIRG1Q13488 830 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 A0A087WUV0 522 aaPredicted RBP18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 USP17L12C9JPN9 530 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 USP17L21D6R901 530 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 EXOC7Q9UPT5 735 aa18.9■□□□□ 0.62
PTP4A1-201ENST00000370651 NDC80O14777 642 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 SCG2P13521 617 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 CERS3Q8IU89 383 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 PCDHB13Q9Y5F0 798 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 SEPT6Q14141 434 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 APOA5Q6Q788 366 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 SARM1Q6SZW1 724 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 MIPOL1Q8TD10 442 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 TUBGCP2Q9BSJ2 902 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 GCKP35557 465 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 LONP1P36776 959 aaKnown RBP18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 EPHB4P54760 987 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 HNRNPH2P55795 449 aaKnown RBP18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 LRRC24Q50LG9 513 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 PPP1R21Q6ZMI0 780 aa18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 ENOX1Q8TC92 643 aaKnown RBP18.89■□□□□ 0.61
PTP4A1-201ENST00000370651 FOXP1Q9H334 677 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms