RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 ATP6V0A2Q9Y487 856 aa5.82□□□□□ -1.48
UBE3D-202ENST00000369746 COL4A1P02462 1669 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 SGSM2O43147 1006 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 RASA1P20936 1047 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 SMARCA1P28370 1054 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 ICA1Q05084 483 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 PARP10Q53GL7 1025 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 SH3D19Q5HYK7 790 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 MYSM1Q5VVJ2 828 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 CCDC30Q5VVM6 783 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 GAS2L3Q86XJ1 694 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 EXOC6Q8TAG9 804 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 FRS2Q8WU20 508 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 DCPSQ96C86 337 aaKnown RBP5.81□□□□□ -1.48
UBE3D-202ENST00000369746 COL25A1Q9BXS0 654 aaPredicted RBP5.81□□□□□ -1.48
UBE3D-202ENST00000369746 IL16Q14005 1332 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 H0Y3Z8 333 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 CCP110O43303 1012 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 FIBPO43427 364 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 RPN1P04843 607 aaKnown RBP5.81□□□□□ -1.48
UBE3D-202ENST00000369746 MYCLP1P12525 358 aaPredicted RBP5.81□□□□□ -1.48
UBE3D-202ENST00000369746 HNRNPH2P55795 449 aaKnown RBP5.81□□□□□ -1.48
UBE3D-202ENST00000369746 TRAF1Q13077 416 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 RNF20Q5VTR2 975 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 ERAP2Q6P179 960 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 FAM117BQ6P1L5 589 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 OTOP1Q7RTM1 612 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 MORC1Q86VD1 984 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 GABPB2Q8TAK5 448 aaPredicted RBP5.81□□□□□ -1.48
UBE3D-202ENST00000369746 NOL10Q9BSC4 688 aaKnown RBP5.81□□□□□ -1.48
UBE3D-202ENST00000369746 RNF39Q9H2S5 420 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 DAAM1Q9Y4D1 1078 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 COL4A5P29400 1685 aa5.81□□□□□ -1.48
UBE3D-202ENST00000369746 STIP1P31948 543 aaKnown RBP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 MAGEA9P43362 315 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 ZNF157P51786 506 aaPredicted RBP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 FKBP1AP62942 108 aaKnown RBP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 NOLC1Q14978 699 aaKnown RBP eCLIP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 COBLL1Q53SF7 1204 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 TAX1BP1Q86VP1 789 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 KIF1BPQ96EK5 621 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 EYA1Q99502 592 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 SLC7A5P2Q9GIP4 190 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 ABCG4Q9H172 646 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 MRS2Q9HD23 443 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 SRP68Q9UHB9 627 aaKnown RBP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 SLC27A2O14975 620 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 PIP5K1CO60331 668 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 HOXD10P28358 340 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 ADCY2Q08462 1091 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 MAP2K5Q13163 448 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 TTC31Q49AM3 519 aaPredicted RBP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 TMEM164Q5U3C3 297 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 CAVIN1Q6NZI2 390 aaKnown RBP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 JAMLQ86YT9 394 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 SAMD3Q8N6K7 520 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 ANKRD20A12PQ8NF67 263 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 KIF18AQ8NI77 898 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 EYA3Q99504 573 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 MAP3K14Q99558 947 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 P2RX7Q99572 595 aaKnown RBP5.8□□□□□ -1.48
UBE3D-202ENST00000369746 MTMR10Q9NXD2 777 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 PSD3Q9NYI0 1048 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 TMOD4Q9NZQ9 345 aa5.8□□□□□ -1.48
UBE3D-202ENST00000369746 MYO1CO00159 1063 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 U2AF2P26368 475 aaKnown RBP eCLIP5.79□□□□□ -1.48
UBE3D-202ENST00000369746 NF2P35240 595 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 USP8P40818 1118 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 CDKN1CP49918 316 aaPredicted RBP5.79□□□□□ -1.48
UBE3D-202ENST00000369746 HSD17B7P56937 341 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 SNX16P57768 344 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 BPIFB3P59826 476 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 PPP2R5CQ13362 524 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 PDCD2Q16342 344 aaPredicted RBP5.79□□□□□ -1.48
UBE3D-202ENST00000369746 TEX35Q5T0J7 233 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.79□□□□□ -1.48
UBE3D-202ENST00000369746 TRIM11Q96F44 468 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 TBC1D32Q96NH3 1257 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 AGAP3Q96P47 875 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 UCN2Q96RP3 112 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 RIC8AQ9NPQ8 531 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 IRAK4Q9NWZ3 460 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 DCAF16Q9NXF7 216 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 ETAA1Q9NY74 926 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.79□□□□□ -1.48
UBE3D-202ENST00000369746 RCAN3Q9UKA8 241 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 RRP15Q9Y3B9 282 aaKnown RBP5.79□□□□□ -1.48
UBE3D-202ENST00000369746 ADGRA2Q96PE1 1338 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 TNFRSF10AO00220 468 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 PPP1R37O75864 691 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 GJA8P48165 433 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 NUCB2P80303 420 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 SLMAPQ14BN4 828 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 GRAMD1BQ3KR37 738 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 KLHL10Q6JEL2 608 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 PDXDC2PQ6P474 469 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 KSR2Q6VAB6 950 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 ARMC9Q7Z3E5 817 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 E2F7Q96AV8 911 aa5.79□□□□□ -1.48
UBE3D-202ENST00000369746 GDF15Q99988 308 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms