RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 CCDC175P0C221 793 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 CD44P16070 742 aaKnown RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 FGFR2P21802 821 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 PLCD1P51178 756 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 PPARDQ03181 441 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 TBX2Q13207 712 aaPredicted RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 RNF41Q9H4P4 317 aaPredicted RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 SPEF2Q9C093 1822 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 GYG1P46976 350 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 SETQ01105 290 aaPredicted RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 BRD3Q15059 726 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 KANK3Q6NY19 840 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 TMTC2Q8N394 836 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 AFAP1L1Q8TED9 768 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 STAG1Q8WVM7 1258 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 ESR2Q92731 530 aa17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
SYNCRIP-202ENST00000369622 MYO5AQ9Y4I1 1855 aaKnown RBP17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 WNT7AO00755 349 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 ZNF569Q5MCW4 686 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 FCHSD1Q86WN1 690 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 MIEF2Q96C03 454 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 L1RE1Q9UN81 338 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 GOLGA6L9A6NEM1 432 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 CDC25AP30304 524 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 CASP14P31944 242 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 INPP5BP32019 993 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 SARSP49591 514 aaKnown RBP17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 NR1I3Q14994 352 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 VPS16Q9H269 839 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 SYNRGQ9UMZ2 1314 aa17.96■□□□□ 0.47
SYNCRIP-202ENST00000369622 KRT2P35908 639 aa17.96■□□□□ 0.46
SYNCRIP-202ENST00000369622 DYNLL1P63167 89 aaKnown RBP17.96■□□□□ 0.46
SYNCRIP-202ENST00000369622 KIF4BQ2VIQ3 1234 aa17.96■□□□□ 0.46
SYNCRIP-202ENST00000369622 FILIP1LQ4L180 1135 aa17.96■□□□□ 0.46
SYNCRIP-202ENST00000369622 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.46
SYNCRIP-202ENST00000369622 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 ELF1P32519 619 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 SARNPP82979 210 aaKnown RBP17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 RAD9BQ6WBX8 426 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 PAGE5Q96GU1 130 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 MAGEB6P1A0A0J9YX57 407 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 EBAG9O00559 213 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 MYO1BO43795 1136 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 GNAT2P19087 354 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 RDXP35241 583 aaKnown RBP17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 ACSBG1Q96GR2 724 aa17.95■□□□□ 0.46
SYNCRIP-202ENST00000369622 PKD1L3Q7Z443 1732 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 CATIPQ7Z7H3 387 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 N4BP3O15049 544 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 KIF5CO60282 957 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 MCM7P33993 719 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 USP8P40818 1118 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 CHRNDQ07001 517 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 GRIPAP1Q4V328 841 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 RRAGBQ5VZM2 374 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 CEP57Q86XR8 500 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 ENAHQ8N8S7 591 aaPredicted RBP17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 RASSF8Q8NHQ8 419 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 SHISA4Q96DD7 197 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 FAXDC2Q96IV6 333 aa17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 NIP7Q9Y221 180 aaKnown RBP eCLIP17.94■□□□□ 0.46
SYNCRIP-202ENST00000369622 ERLIN1O75477 346 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 ZMYND10O75800 440 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 PTGDRQ13258 359 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 SPATA1Q5VX52 437 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 FAM71BQ8TC56 605 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 JAG2Q9Y219 1238 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 TNS2Q63HR2 1409 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 AKAP11Q9UKA4 1901 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 NMT2O60551 498 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 SSBP05455 408 aaKnown RBP eCLIP17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 NF2P35240 595 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 EVX2Q03828 476 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 TRIML1Q8N9V2 468 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 ACRBPQ8NEB7 543 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 NUP88Q99567 741 aaPredicted RBP17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 NT5DC1Q5TFE4 455 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 PIK3AP1Q6ZUJ8 805 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 ZNF579Q8NAF0 562 aaKnown RBP17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 KAT14Q9H8E8 782 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 C4BP0C0L5 1744 aa17.93■□□□□ 0.46
SYNCRIP-202ENST00000369622 ATRNO75882 1429 aa17.92■□□□□ 0.46
SYNCRIP-202ENST00000369622 A0A1B0GTH6 734 aa17.92■□□□□ 0.46
SYNCRIP-202ENST00000369622 ERCC5P28715 1186 aaPredicted RBP17.92■□□□□ 0.46
SYNCRIP-202ENST00000369622 CCDC152Q4G0S7 254 aa17.92■□□□□ 0.46
SYNCRIP-202ENST00000369622 FAM47AQ5JRC9 791 aa17.92■□□□□ 0.46
SYNCRIP-202ENST00000369622 IQCA1Q86XH1 822 aa17.92■□□□□ 0.46
SYNCRIP-202ENST00000369622 BCAS4Q8TDM0 211 aa17.92■□□□□ 0.46
SYNCRIP-202ENST00000369622 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms