RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 A0A1W2PRG0 241 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 FAM83AQ86UY5 434 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 ZNF396Q96N95 335 aaPredicted RBP16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 GOLPH3LQ9H4A5 285 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 CFAP45Q9UL16 551 aa16.28■□□□□ 0.2
HMGCS2-201ENST00000369406 NASPP49321 788 aaPredicted RBP16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 KIAA1755Q5JYT7 1200 aa16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 KCTD1Q719H9 257 aa16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 CCDC84Q86UT8 332 aaPredicted RBP16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 PIGSQ96S52 555 aa16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 SPZ1Q9BXG8 430 aa16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 VAT1LQ9HCJ6 419 aa16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 HACL1Q9UJ83 578 aa16.27■□□□□ 0.2
HMGCS2-201ENST00000369406 ICA1Q05084 483 aa16.27■□□□□ 0.19
HMGCS2-201ENST00000369406 ZNF543Q08ER8 600 aa16.27■□□□□ 0.19
HMGCS2-201ENST00000369406 PTPAQ15257 358 aa16.27■□□□□ 0.19
HMGCS2-201ENST00000369406 ANO1Q5XXA6 986 aa16.27■□□□□ 0.19
HMGCS2-201ENST00000369406 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.19
HMGCS2-201ENST00000369406 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.19
HMGCS2-201ENST00000369406 MYO1BO43795 1136 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 SLC16A2P36021 539 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 EPS15P42566 896 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 ECE1P42892 770 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 HOMER1Q86YM7 354 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 MKL1Q969V6 931 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 PCDHA7Q9UN72 937 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 SYCE3A1L190 88 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 FSD2A1L4K1 749 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 STXBP3O00186 592 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 GNL2Q13823 731 aaKnown RBP16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 GPRC5DQ9NZD1 345 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 MRVI1Q9Y6F6 885 aa16.26■□□□□ 0.19
HMGCS2-201ENST00000369406 GNAQP50148 359 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 CSPP1Q1MSJ5 1256 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 PRAMEF18Q5VWM3 479 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 RASGRP4Q8TDF6 673 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 GLIS2Q9BZE0 524 aaPredicted RBP16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 RIOX1Q9H6W3 641 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 FZD1Q9UP38 647 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 DDNO94850 711 aaPredicted RBP16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 ATL3Q6DD88 541 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 ZBTB21Q9ULJ3 1066 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 PCDHB6Q9Y5E3 794 aa16.25■□□□□ 0.19
HMGCS2-201ENST00000369406 NR1I2O75469 434 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 KRT2P35908 639 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 MAP3K10Q02779 954 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 DLK2Q6UY11 383 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 RNF181Q9P0P0 153 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 PHF20L1A8MW92 1017 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 RAD21O60216 631 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 STK38Q15208 465 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 GPC2Q8N158 579 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 JMJD4Q9H9V9 463 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 DOCK1Q14185 1865 aa16.24■□□□□ 0.19
HMGCS2-201ENST00000369406 M0R2N6 131 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 TBC1D12O60347 775 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 ATP2B1P20020 1258 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 ME1P48163 572 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 ZNF445P59923 1031 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 CCDC96Q2M329 555 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 NBPF12Q5TAG4 269 aaPredicted RBP16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 ANGEL2Q5VTE6 544 aaKnown RBP16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 ADGRF4Q8IZF3 695 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 LZTS2Q9BRK4 669 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 BARHL2Q9NY43 387 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 USP17L10C9JJH3 530 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 SPTLC2O15270 562 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 YEATS4O95619 227 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 NDUFB10O96000 172 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 NLRP5P59047 1200 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 GRIN1Q05586 938 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 SLC39A14Q15043 492 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 SLFN13Q68D06 897 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 DEFB129Q9H1M3 183 aa16.23■□□□□ 0.19
HMGCS2-201ENST00000369406 SSC5DA1L4H1 1573 aa16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 F5H6K3 240 aa16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 TAL1P17542 331 aaPredicted RBP16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 KLRC3Q07444 240 aa16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 SPICE1Q8N0Z3 855 aa16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
HMGCS2-201ENST00000369406 SNAP25P60880 206 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms