RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ANP32EQ9BTT0 268 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 MTMR10Q9NXD2 777 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 A0A1W2PRG0 241 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 SLC15A5A6NIM6 579 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 SPDYE16A6NNV3 312 aaPredicted RBP11.81□□□□□ -0.52
TPM3-210ENST00000368530 HSPA4P34932 840 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 GRB14Q14449 540 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 NBR1Q14596 966 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 CERKLQ49MI3 558 aaPredicted RBP11.81□□□□□ -0.52
TPM3-210ENST00000368530 TTC6Q86TZ1 520 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 TRPV1Q8NER1 839 aa11.81□□□□□ -0.52
TPM3-210ENST00000368530 DNAH12Q6ZR08 3092 aa11.8□□□□□ -0.52
TPM3-210ENST00000368530 CCDC171Q6TFL3 1326 aa11.8□□□□□ -0.52
TPM3-210ENST00000368530 K7ELQ4 463 aaPredicted RBP11.8□□□□□ -0.52
TPM3-210ENST00000368530 USP5P45974 858 aa11.8□□□□□ -0.52
TPM3-210ENST00000368530 USP14P54578 494 aa11.8□□□□□ -0.52
TPM3-210ENST00000368530 RAB3GAP1Q15042 981 aa11.8□□□□□ -0.52
TPM3-210ENST00000368530 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
TPM3-210ENST00000368530 TMED8Q6PL24 325 aaPredicted RBP11.8□□□□□ -0.52
TPM3-210ENST00000368530 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
TPM3-210ENST00000368530 ZNF589Q86UQ0 364 aaPredicted RBP11.8□□□□□ -0.52
TPM3-210ENST00000368530 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.8□□□□□ -0.52
TPM3-210ENST00000368530 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
TPM3-210ENST00000368530 UBE2OQ9C0C9 1292 aaKnown RBP11.8□□□□□ -0.52
TPM3-210ENST00000368530 ST18O60284 1047 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 NEK4P51957 841 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 ANAPC15P60006 121 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 CCNA1P78396 465 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 MAP3K12Q12852 859 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 SEPT2Q15019 361 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 KIAA1755Q5JYT7 1200 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 SIAH1Q8IUQ4 282 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 CCAR1Q8IX12 1150 aaKnown RBP11.79□□□□□ -0.52
TPM3-210ENST00000368530 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
TPM3-210ENST00000368530 STXBP5LQ9Y2K9 1186 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 RBM8AQ9Y5S9 174 aaKnown RBP11.79□□□□□ -0.52
TPM3-210ENST00000368530 SNX14Q9Y5W7 946 aa11.79□□□□□ -0.52
TPM3-210ENST00000368530 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
TPM3-210ENST00000368530 POTEB2H3BUK9 544 aa11.78□□□□□ -0.52
TPM3-210ENST00000368530 EPB41L2O43491 1005 aaKnown RBP11.78□□□□□ -0.52
TPM3-210ENST00000368530 HSP90AA1P07900 732 aaKnown RBP11.78□□□□□ -0.52
TPM3-210ENST00000368530 CYP2C19P33261 490 aa11.78□□□□□ -0.52
TPM3-210ENST00000368530 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
TPM3-210ENST00000368530 MFSD14CQ5VZR4 134 aa11.78□□□□□ -0.52
TPM3-210ENST00000368530 NOL8Q76FK4 1167 aaKnown RBP11.78□□□□□ -0.52
TPM3-210ENST00000368530 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
TPM3-210ENST00000368530 FEZ1Q99689 392 aa11.78□□□□□ -0.52
TPM3-210ENST00000368530 UPF3BQ9BZI7 483 aaKnown RBP11.78□□□□□ -0.52
TPM3-210ENST00000368530 DDX20Q9UHI6 824 aaKnown RBP11.78□□□□□ -0.52
TPM3-210ENST00000368530 MYH1P12882 1939 aa11.78□□□□□ -0.52
TPM3-210ENST00000368530 LAMA2P24043 3122 aaKnown RBP11.77□□□□□ -0.52
TPM3-210ENST00000368530 RNF113AO15541 343 aaKnown RBP11.77□□□□□ -0.52
TPM3-210ENST00000368530 CYBAP13498 195 aa11.77□□□□□ -0.52
TPM3-210ENST00000368530 COG2Q14746 738 aa11.77□□□□□ -0.52
TPM3-210ENST00000368530 MCMDC2Q4G0Z9 681 aa11.77□□□□□ -0.52
TPM3-210ENST00000368530 LPAR1Q92633 364 aa11.77□□□□□ -0.52
TPM3-210ENST00000368530 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.52
TPM3-210ENST00000368530 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.52
TPM3-210ENST00000368530 CABP5Q9NP86 173 aa11.77□□□□□ -0.52
TPM3-210ENST00000368530 MAGEB6P1A0A0J9YX57 407 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 COBLO75128 1261 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 PDE6AP16499 860 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 SLC9C2Q5TAH2 1124 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 DCP1AQ9NPI6 582 aaPredicted RBP11.76□□□□□ -0.53
TPM3-210ENST00000368530 CUL9Q8IWT3 2517 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 DNM1LO00429 736 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 MSCO60682 206 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
TPM3-210ENST00000368530 CYP2D6P10635 497 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 ADORA2AP29274 412 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 ZMYM1Q5SVZ6 1142 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 WDR78Q5VTH9 848 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 OLFML2BQ68BL8 750 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 SLC44A5Q8NCS7 719 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 SDR42E1Q8WUS8 393 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 MAP4K1Q92918 833 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 SPATC1LQ9H0A9 340 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
TPM3-210ENST00000368530 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
TPM3-210ENST00000368530 RLFQ13129 1914 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 M0R2C6 588 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 SLC27A2O14975 620 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 STRNO43815 780 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 CPA1P15085 419 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 ATN1P54259 1190 aaPredicted RBP11.75□□□□□ -0.53
TPM3-210ENST00000368530 NECTIN1Q15223 517 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 FAM109BQ6ICB4 259 aaPredicted RBP11.75□□□□□ -0.53
TPM3-210ENST00000368530 LCORLQ8N3X6 602 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 SHCBP1Q8NEM2 672 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
TPM3-210ENST00000368530 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
TPM3-210ENST00000368530 HELLSQ9NRZ9 838 aa11.75□□□□□ -0.53
TPM3-210ENST00000368530 MCM9Q9NXL9 1143 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms