RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 RTN1Q16799 776 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 TMEM132AQ24JP5 1023 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 SLC35G1Q2M3R5 365 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 KIF4BQ2VIQ3 1234 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 FOXD4L5Q5VV16 416 aaPredicted RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 LARP1BQ659C4 914 aaKnown RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 CATIPQ7Z7H3 387 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 LAPTM4BQ86VI4 370 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 NUP133Q8WUM0 1156 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 FOXD4L4Q8WXT5 416 aaPredicted RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 CHAMP1Q96JM3 812 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 CCDC17Q96LX7 622 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 CSRNP1Q96S65 589 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 MAP3K14Q99558 947 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 SCAF8Q9UPN6 1271 aaKnown RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 PCDHGA10Q9Y5H3 936 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 SIPA1L1O43166 1804 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 H7C1D1 291 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 MYO1BO43795 1136 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
VTA1-201ENST00000367621 TOP1P11387 765 aaKnown RBP11.06□□□□□ -0.64
VTA1-201ENST00000367621 GRM4Q14833 912 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 PPP2R5BQ15173 497 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 CDC37L1Q7L3B6 337 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 CLEC10AQ8IUN9 316 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 ANKK1Q8NFD2 765 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 PHKBQ93100 1093 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 ORC3Q9UBD5 711 aaPredicted RBP11.06□□□□□ -0.64
VTA1-201ENST00000367621 HACL1Q9UJ83 578 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 WDR33Q9C0J8 1336 aaKnown RBP11.06□□□□□ -0.64
VTA1-201ENST00000367621 UTRNP46939 3433 aa11.06□□□□□ -0.64
VTA1-201ENST00000367621 CPLX1O14810 134 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
VTA1-201ENST00000367621 F13A1P00488 732 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 CALM1P0DP23 149 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 CALM2P0DP24 149 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 CALM3P0DP25 149 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 PDCP20941 246 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 MCM4P33991 863 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 GPR162Q16538 588 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 CERKLQ49MI3 558 aaPredicted RBP11.05□□□□□ -0.64
VTA1-201ENST00000367621 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 RASGRP2Q7LDG7 609 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
VTA1-201ENST00000367621 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
VTA1-201ENST00000367621 MKL1Q969V6 931 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 SHISA4Q96DD7 197 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 AIFM3Q96NN9 605 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 KAT14Q9H8E8 782 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 MAD2L2Q9UI95 211 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 HERC5Q9UII4 1024 aaKnown RBP11.05□□□□□ -0.64
VTA1-201ENST00000367621 STK36Q9NRP7 1315 aa11.05□□□□□ -0.64
VTA1-201ENST00000367621 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 PALM3A6NDB9 673 aaPredicted RBP11.04□□□□□ -0.64
VTA1-201ENST00000367621 PHF20L1A8MW92 1017 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 GRIN3BO60391 1043 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 CDKL5O76039 1030 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 GDF11O95390 407 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 PDIA4P13667 645 aaKnown RBP11.04□□□□□ -0.64
VTA1-201ENST00000367621 RESTQ13127 1097 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 SEPT2Q15019 361 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 PKN1Q16512 942 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 OTUD7BQ6GQQ9 843 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 RGS22Q8NE09 1264 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 DEFB129Q9H1M3 183 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.04□□□□□ -0.64
VTA1-201ENST00000367621 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 GJB4Q9NTQ9 266 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 RBM28Q9NW13 759 aaKnown RBP11.04□□□□□ -0.64
VTA1-201ENST00000367621 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 STX8Q9UNK0 236 aa11.04□□□□□ -0.64
VTA1-201ENST00000367621 MYH1P12882 1939 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 ECM29Q5VYK3 1845 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
VTA1-201ENST00000367621 TTLL1O95922 423 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 GH2P01242 217 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 VEGFAP15692 232 aaPredicted RBP11.03□□□□□ -0.64
VTA1-201ENST00000367621 COL9A1P20849 921 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 TNNI2P48788 182 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 SSRP1Q08945 709 aaKnown RBP11.03□□□□□ -0.64
VTA1-201ENST00000367621 ABCB5Q2M3G0 1257 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 ANGEL2Q5VTE6 544 aaKnown RBP11.03□□□□□ -0.64
VTA1-201ENST00000367621 TMEM179Q6ZVK1 233 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 FAM184AQ8NB25 1140 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 FBXO18Q8NFZ0 1043 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 SLC26A6Q9BXS9 759 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 KANSL2Q9H9L4 492 aa11.03□□□□□ -0.64
VTA1-201ENST00000367621 CLIP2Q9UDT6 1046 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms