RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 IQCB1Q15051 598 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZSCAN26Q16670 478 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CCDC96Q2M329 555 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 BLIDQ8IZY5 108 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 RBM17Q96I25 401 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 PANX2Q96RD6 677 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 PIH1D3Q9NQM4 214 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CETN1Q12798 172 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 DDX17Q92841 729 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 HAUS4Q9H6D7 363 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CTNND2Q9UQB3 1225 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 LEMD3Q9Y2U8 911 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 AKAP12Q02952 1782 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 GSTTP1A0A1W2PQM5 241 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 NBPF26B4DH59 902 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 IDEP14735 1019 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 OAS2P29728 719 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 KARSQ15046 597 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ELF2Q15723 593 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 NBPF10Q6P3W6 841 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CPLX4Q7Z7G2 160 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CCDC84Q86UT8 332 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 NBPF15Q8N660 670 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 RETREG2Q8NC44 543 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 NEK11Q8NG66 645 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 LZTFL1Q9NQ48 299 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 PRPHP41219 470 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 TBC1D8BQ0IIM8 1120 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 BRINP3Q76B58 766 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 NOC4LQ9BVI4 516 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 FAM114A2Q9NRY5 505 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 VPS54Q9P1Q0 977 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 SERPINA10Q9UK55 444 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CHMP4BP1P59074 171 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 CACNA2D3Q8IZS8 1091 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 OR8K1Q8NGG5 319 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 SELENOSQ9BQE4 189 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 RNF216Q9NWF9 866 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 KRT9P35527 623 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 MCAMP43121 646 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 MXRA7P84157 204 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 CABP7Q86V35 215 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 PIGBQ92521 554 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 RABGGTAQ92696 567 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 STMN4Q9H169 189 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 SH3GLB2Q9NR46 395 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 RIPOR2Q9Y4F9 1068 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 ATP2B4P23634 1241 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 ORC2Q13416 577 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZNF658Q5TYW1 1059 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 STOX1Q6ZVD7 989 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 NELFBQ8WX92 580 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 NGLY1Q96IV0 654 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 VPS16Q9H269 839 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 GOLPH3LQ9H4A5 285 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 SAMD15Q9P1V8 674 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 USP17L12C9JPN9 530 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 USP17L21D6R901 530 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 TFAP4Q01664 338 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 DBN1Q16643 649 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 CLIC6Q96NY7 704 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 MYL10Q9BUA6 226 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 VAT1LQ9HCJ6 419 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZNF215Q9UL58 517 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZBTB1Q9Y2K1 713 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 C6orf229H3BNL8 230 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 CSGALNACT2Q8N6G5 542 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 SH2D4BQ5SQS7 431 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 DHX40Q8IX18 779 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 CSRNP2Q9H175 543 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 TUBE1Q9UJT0 475 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 LOC102724428A0A0B4J2F2 783 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 CYP19A1P11511 503 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 SIK1P57059 783 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 HSP90AA4PQ58FG1 418 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 TRIM7Q9C029 511 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 MMRN2Q9H8L6 949 aa5.97□□□□□ -1.45
CDC42BPA-204ENST00000366767 EEF1GP26641 437 aaKnown RBP5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 TSNAXIP1Q2TAA8 658 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 CCDC122Q5T0U0 273 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 PPP2R5AQ15172 486 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 LONRF3Q496Y0 759 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 TEX11Q8IYF3 940 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 RPUSD2Q8IZ73 545 aaKnown RBP5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 JAKMIP2Q96AA8 810 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 IFT74Q96LB3 600 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 EYA3Q99504 573 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 LY9Q9HBG7 655 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 PUF60Q9UHX1 559 aaKnown RBP5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 RWDD2AQ9UIY3 292 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 RABGAP1Q9Y3P9 1069 aa5.96□□□□□ -1.45
CDC42BPA-204ENST00000366767 NWD1Q149M9 1564 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 A0A1W2PRG0 241 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 RPL13P26373 211 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 BCAMP50895 628 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 TRAPPC3LQ5T215 181 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 ENGASEQ8NFI3 743 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 STIM2Q9P246 746 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 PCDHA4Q9UN74 947 aa5.96□□□□□ -1.46
CDC42BPA-204ENST00000366767 RBM5P52756 815 aaKnown RBP eCLIP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms