RNA–Protein interactions for RNA: ENST00000363468.1

RNU1-49P-201, Transcript of RNA, U1 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU1-49P, Length 159 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-49P-201ENST00000363468 PPP2R5BQ15173 497 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 RASAL3Q86YV0 1011 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 HSCBQ8IWL3 235 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 CCDC144CPQ8IYA2 1237 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 SPICE1Q8N0Z3 855 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 CTCFLQ8NI51 663 aaPredicted RBP7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 LPAR1Q92633 364 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 GTF3C6Q969F1 213 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 CCDC102AQ96A19 550 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 TMX3Q96JJ7 454 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 SLKQ9H2G2 1235 aaPredicted RBP7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 FAM217BQ9NTX9 383 aaPredicted RBP7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 TMOD4Q9NZQ9 345 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 MAD2L2Q9UI95 211 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 MTMR7Q9Y216 660 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 RLFQ13129 1914 aa7.28□□□□□ -1.24
RNU1-49P-201ENST00000363468 CCDC196A0A1B0GTZ2 297 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 RASSF10A6NK89 507 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 TMEM232C9JQI7 657 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 KLRF2D3W0D1 207 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 WDR46O15213 610 aaKnown RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 SLC10A3P09131 477 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 CETPP11597 493 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 VCAM1P19320 739 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 SMARCA1P28370 1054 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 ANP32AP39687 249 aaKnown RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 GTF2A2P52657 109 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 ZNF543Q08ER8 600 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 ST3GAL1Q11201 340 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 MKRN3Q13064 507 aaKnown RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 BECN1Q14457 450 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 RTN1Q16799 776 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 CCDC96Q2M329 555 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 DEFB115Q30KQ5 88 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 ASPRV1Q53RT3 343 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 FAM83BQ5T0W9 1011 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 GPATCH4Q5T3I0 446 aaKnown RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 GADL1Q6ZQY3 521 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 KCTD1Q719H9 257 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 FASTKD5Q7L8L6 764 aaKnown RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 CCDC83Q8IWF9 413 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 NECAB1Q8N987 351 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 PROCA1Q8NCQ7 364 aaPredicted RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 CHMP4CQ96CF2 233 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 MS4A4AQ96JQ5 239 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 NUP88Q99567 741 aaPredicted RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 LZTS2Q9BRK4 669 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 NCOA5Q9HCD5 579 aaKnown RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 GPCPD1Q9NPB8 672 aa7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 RBM28Q9NW13 759 aaKnown RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 FRMPD2Q68DX3 1309 aaPredicted RBP7.27□□□□□ -1.25
RNU1-49P-201ENST00000363468 CCL15-CCL14A0A0B4J2E2 113 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 TESPA1A2RU30 521 aaPredicted RBP7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L15C9J2P7 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L13C9JLJ4 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L11C9JVI0 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L18D6R9N7 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L22D6RA61 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L17D6RBQ6 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L19D6RCP7 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L20D6RJB6 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 DHX16O60231 1041 aaKnown RBP7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 PLA2G6O60733 806 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 PLEKHA8P1O95397 391 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 CTDNEP1O95476 244 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 HOXA7P31268 230 aaPredicted RBP7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 ADD1P35611 737 aaKnown RBP7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 GNAQP50148 359 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 USP17L24Q0WX57 530 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 FUT2Q10981 343 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 CUL4AQ13619 759 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 NTRK3Q16288 839 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 CCL15Q16663 113 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 SLC35G1Q2M3R5 365 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 TREML2Q5T2D2 321 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 TTBK2Q6IQ55 1244 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 GPAT2Q6NUI2 795 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 BTNL9Q6UXG8 535 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 CATSPERGQ6ZRH7 1159 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 TMTC3Q6ZXV5 915 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 NBPF11Q86T75 865 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 CMTR1Q8N1G2 835 aaKnown RBP7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 BRI3BPQ8WY22 251 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 LLPHQ9BRT6 129 aaKnown RBP7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 UBA5Q9GZZ9 404 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 RPAP3Q9H6T3 665 aaPredicted RBP7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 FEM1BQ9UK73 627 aa7.26□□□□□ -1.25
RNU1-49P-201ENST00000363468 SMCHD1A6NHR9 2005 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 COL11A1P12107 1806 aaPredicted RBP7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 MANSC4A6NHS7 340 aaPredicted RBP7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 CPLX1O14810 134 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 CYTH3O43739 400 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 FLOT1O75955 427 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 CDKL5O76039 1030 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 IFNAR1P17181 557 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 DSG3P32926 999 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 SLC16A2P36021 539 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 STAT2P52630 851 aa7.25□□□□□ -1.25
RNU1-49P-201ENST00000363468 INHBEP58166 350 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms