RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 LRP2BPQ9P2M1 347 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 ESYT3A0FGR9 886 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 MBD4O95243 580 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 RESP18Q5W5W9 173 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 APOA5Q6Q788 366 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 MICALCLQ6ZW33 695 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 RASGRP2Q7LDG7 609 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 SMCR8Q8TEV9 937 aaPredicted RBP14.22□□□□□ -0.13
VAMP1-201ENST00000361716 EPSTI1Q96J88 318 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 EHD2Q9NZN4 543 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 BAIAP2L1Q9UHR4 511 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 HPS5Q9UPZ3 1129 aa14.22□□□□□ -0.13
VAMP1-201ENST00000361716 RNF225M0QZC1 329 aaPredicted RBP14.21□□□□□ -0.13
VAMP1-201ENST00000361716 PRKAB2O43741 272 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 ENOX2Q16206 610 aaKnown RBP14.21□□□□□ -0.13
VAMP1-201ENST00000361716 CCDC96Q2M329 555 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 NKX2-3Q8TAU0 364 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 FAM205CA6NFA0 338 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 CDC25CP30307 473 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 NNTQ13423 1086 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 NAA15Q9BXJ9 866 aaKnown RBP14.21□□□□□ -0.13
VAMP1-201ENST00000361716 TRMT112Q9UI30 125 aaKnown RBP14.21□□□□□ -0.13
VAMP1-201ENST00000361716 DUSP10Q9Y6W6 482 aa14.21□□□□□ -0.13
VAMP1-201ENST00000361716 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.14
VAMP1-201ENST00000361716 MEFVO15553 781 aaPredicted RBP14.21□□□□□ -0.14
VAMP1-201ENST00000361716 PLCD1P51178 756 aa14.21□□□□□ -0.14
VAMP1-201ENST00000361716 TUBB4BP68371 445 aa14.21□□□□□ -0.14
VAMP1-201ENST00000361716 RTN1Q16799 776 aa14.21□□□□□ -0.14
VAMP1-201ENST00000361716 MFSD6Q6ZSS7 791 aa14.21□□□□□ -0.14
VAMP1-201ENST00000361716 CKAP4Q07065 602 aaKnown RBP14.2□□□□□ -0.14
VAMP1-201ENST00000361716 TUBB2AQ13885 445 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 OXER1Q8TDS5 423 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 LRRC1Q9BTT6 524 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 TUBB2BQ9BVA1 445 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 ABHD10Q9NUJ1 306 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 JAG2Q9Y219 1238 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 AGPSO00116 658 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 WTAPQ15007 396 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 CARD10Q9BWT7 1032 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 DMGDHQ9UI17 866 aaKnown RBP14.2□□□□□ -0.14
VAMP1-201ENST00000361716 BAZ2BQ9UIF8 2168 aaKnown RBP14.2□□□□□ -0.14
VAMP1-201ENST00000361716 STRCP1A6NGW2 1772 aa14.2□□□□□ -0.14
VAMP1-201ENST00000361716 PHRF1Q9P1Y6 1649 aaKnown RBP14.2□□□□□ -0.14
VAMP1-201ENST00000361716 A0A1B0GTH6 734 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 CYP27B1O15528 508 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 NDUFA10O95299 355 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 CFAP58Q5T655 872 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
VAMP1-201ENST00000361716 CCNI2Q6ZMN8 369 aaPredicted RBP14.19□□□□□ -0.14
VAMP1-201ENST00000361716 KIF6Q6ZMV9 814 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 MIEF2Q96C03 454 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 CCDC43Q96MW1 224 aaKnown RBP14.19□□□□□ -0.14
VAMP1-201ENST00000361716 CSRNP2Q9H175 543 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 SALL1Q9NSC2 1324 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 MST1RQ04912 1400 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 PXDNQ92626 1479 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 MYO1BO43795 1136 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 CD44P16070 742 aaKnown RBP14.19□□□□□ -0.14
VAMP1-201ENST00000361716 ARHGAP25P42331 645 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 PHKA1P46020 1223 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 SPATA1Q5VX52 437 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 WDR93Q6P2C0 686 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 MED15Q96RN5 788 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 ZNF18P17022 549 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 FOXO4P98177 505 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 TRIM6Q9C030 488 aaPredicted RBP14.19□□□□□ -0.14
VAMP1-201ENST00000361716 HPSEQ9Y251 543 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 LUC7L2Q9Y383 392 aaKnown RBP14.19□□□□□ -0.14
VAMP1-201ENST00000361716 SLC4A4Q9Y6R1 1079 aa14.19□□□□□ -0.14
VAMP1-201ENST00000361716 A0A1B0GUA9 196 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 HDLBPQ00341 1268 aaKnown RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 HLTFQ14527 1009 aaKnown RBP eCLIP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 VIPAS39Q9H9C1 493 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 HAUS2Q9NVX0 235 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 ZNHIT6Q9NWK9 470 aaKnown RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 ZSWIM5Q9P217 1185 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 RIPOR2Q9Y4F9 1068 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 PDE2AO00408 941 aaPredicted RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 KRT86O43790 486 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 TRIM21P19474 475 aaKnown RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 ITGA6P23229 1130 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 CALRP27797 417 aaKnown RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 MCM7P33993 719 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 SNCBQ16143 134 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 MB21D2Q8IYB1 491 aaPredicted RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 CTAGE1Q96RT6 745 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 PPP6R2O75170 966 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 AARSP49588 968 aaKnown RBP eCLIP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 KRT31Q15323 416 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 PNMA8AQ86V59 439 aaPredicted RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 RNPC3Q96LT9 517 aaKnown RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 FAM184BQ9ULE4 1060 aa14.18□□□□□ -0.14
VAMP1-201ENST00000361716 V9GY48 417 aaPredicted RBP14.18□□□□□ -0.14
VAMP1-201ENST00000361716 MCAMP43121 646 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms