RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 ERCC3P19447 782 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 CERS3Q8IU89 383 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
HPS1-204ENST00000361490 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 APOBEC3HQ6NTF7 200 aaKnown RBP13.24□□□□□ -0.29
HPS1-204ENST00000361490 DTHD1Q6ZMT9 781 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 NEDD1Q8NHV4 660 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 TMEM39BQ9GZU3 492 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
HPS1-204ENST00000361490 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
HPS1-204ENST00000361490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
HPS1-204ENST00000361490 NRAPQ86VF7 1730 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 GNA11P29992 359 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 TTLL12Q14166 644 aaPredicted RBP13.23□□□□□ -0.29
HPS1-204ENST00000361490 STYK1Q6J9G0 422 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 TCP11L1Q9NUJ3 509 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 SALL1Q9NSC2 1324 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 CUTAO60888 179 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 CMA1P23946 247 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 UBXN2AP68543 259 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 REXO1Q8N1G1 1221 aaKnown RBP13.23□□□□□ -0.29
HPS1-204ENST00000361490 KIAA1468Q9P260 1216 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 USP17L10C9JJH3 530 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 STAT6P42226 847 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 SHC4Q6S5L8 630 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 C16orf86Q6ZW13 317 aa13.23□□□□□ -0.29
HPS1-204ENST00000361490 SMYD4Q8IYR2 804 aaPredicted RBP13.23□□□□□ -0.29
HPS1-204ENST00000361490 SYMPKQ92797 1274 aaKnown RBP13.23□□□□□ -0.29
HPS1-204ENST00000361490 COL4A1P02462 1669 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 CIAPIN1Q6FI81 312 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 ZSCAN30Q86W11 494 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 CPLX3Q8WVH0 158 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 MTMR4Q9NYA4 1195 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
HPS1-204ENST00000361490 PCDHA5Q9Y5H7 936 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 PP2D1A8MPX8 630 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 CFBP00751 764 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
HPS1-204ENST00000361490 TECP42680 631 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 KARSQ15046 597 aaKnown RBP13.22□□□□□ -0.29
HPS1-204ENST00000361490 FBXO41Q8TF61 875 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
HPS1-204ENST00000361490 FZD1Q9UP38 647 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 PCDHA1Q9Y5I3 950 aa13.22□□□□□ -0.29
HPS1-204ENST00000361490 PFKFB3Q16875 520 aaPredicted RBP13.21□□□□□ -0.29
HPS1-204ENST00000361490 DACT2Q5SW24 774 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 NOC3LQ8WTT2 800 aaKnown RBP13.21□□□□□ -0.29
HPS1-204ENST00000361490 SHTN1A0MZ66 631 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L15C9J2P7 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L11C9JVI0 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L18D6R9N7 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L22D6RA61 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L19D6RCP7 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L20D6RJB6 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 NRDCO43847 1150 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 PTGS1P23219 599 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 RASSF7Q02833 373 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L24Q0WX57 530 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 NONOQ15233 471 aaKnown RBP eCLIP13.21□□□□□ -0.29
HPS1-204ENST00000361490 PKN1Q16512 942 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 NBPF9Q3BBW0 867 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 GJA10Q969M2 543 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
HPS1-204ENST00000361490 CNTNAP5Q8WYK1 1306 aa13.21□□□□□ -0.3
HPS1-204ENST00000361490 TOB1P50616 345 aaPredicted RBP13.2□□□□□ -0.3
HPS1-204ENST00000361490 TBCKQ8TEA7 893 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 C4BP0C0L5 1744 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 ADCY7P51828 1080 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 TMC6Q7Z403 805 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
HPS1-204ENST00000361490 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 FMR1NBQ8N0W7 255 aaPredicted RBP13.2□□□□□ -0.3
HPS1-204ENST00000361490 TRMT1Q9NXH9 659 aaKnown RBP13.2□□□□□ -0.3
HPS1-204ENST00000361490 NRBP1Q9UHY1 535 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 MAD2L2Q9UI95 211 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 PCDHA4Q9UN74 947 aa13.2□□□□□ -0.3
HPS1-204ENST00000361490 MYH3P11055 1940 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 F5H6K3 240 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 CLSTN1O94985 981 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 U2AF2P26368 475 aaKnown RBP eCLIP13.19□□□□□ -0.3
HPS1-204ENST00000361490 CXCL9Q07325 125 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 KLRC3Q07444 240 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 GRM4Q14833 912 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 HHIPL2Q6UWX4 724 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms