RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TPM4P67936 248 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 IFNKQ9P0W0 207 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 NRXN2Q9P2S2 1712 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 A0A087X0B3 334 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 NPR1P16066 1061 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 GNAQP50148 359 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 PTGDRQ13258 359 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 DHX8Q14562 1220 aaKnown RBP25.77■■□□□ 1.72
LDB1-201ENST00000361198 FERMT2Q96AC1 680 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 NT5DC1Q5TFE4 455 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 TYW1BQ6NUM6 668 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 NEDD1Q8NHV4 660 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 ZC3H12CQ9C0D7 883 aaKnown RBP25.76■■□□□ 1.71
LDB1-201ENST00000361198 MAN1B1Q9UKM7 699 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 F8W031 263 aaPredicted RBP25.76■■□□□ 1.71
LDB1-201ENST00000361198 SMC2O95347 1197 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 SARSP49591 514 aaKnown RBP25.76■■□□□ 1.71
LDB1-201ENST00000361198 ATP2C1P98194 919 aaPredicted RBP25.76■■□□□ 1.71
LDB1-201ENST00000361198 MYL5Q02045 173 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 RASGRP2Q7LDG7 609 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 CERS5Q8N5B7 392 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 SYMPKQ92797 1274 aaKnown RBP25.76■■□□□ 1.71
LDB1-201ENST00000361198 SH3GLB2Q9NR46 395 aa25.76■■□□□ 1.71
LDB1-201ENST00000361198 PALM3A6NDB9 673 aaPredicted RBP25.75■■□□□ 1.71
LDB1-201ENST00000361198 ATP1A3P13637 1013 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 CALML3P27482 149 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 KCNJ6P48051 423 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 BLIDQ8IZY5 108 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 CCDC150Q8NCX0 1101 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 MMP10P09238 476 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 GOLGA8HP0CJ92 632 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 TRAPPC10P48553 1259 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 KANK3Q6NY19 840 aa25.75■■□□□ 1.71
LDB1-201ENST00000361198 DHX58Q96C10 678 aa25.74■■□□□ 1.71
LDB1-201ENST00000361198 FOCADQ5VW36 1801 aa25.74■■□□□ 1.71
LDB1-201ENST00000361198 VWA3AA6NCI4 1184 aa25.74■■□□□ 1.71
LDB1-201ENST00000361198 DOK7Q18PE1 504 aa25.74■■□□□ 1.71
LDB1-201ENST00000361198 SMARCE1Q969G3 411 aa25.74■■□□□ 1.71
LDB1-201ENST00000361198 MXD3Q9BW11 206 aa25.74■■□□□ 1.71
LDB1-201ENST00000361198 PCDHA4Q9UN74 947 aa25.74■■□□□ 1.71
LDB1-201ENST00000361198 KIF2AO00139 706 aaPredicted RBP25.73■■□□□ 1.71
LDB1-201ENST00000361198 ALDH1B1P30837 517 aa25.73■■□□□ 1.71
LDB1-201ENST00000361198 PICALMQ13492 652 aa25.73■■□□□ 1.71
LDB1-201ENST00000361198 WWC2Q6AWC2 1192 aa25.73■■□□□ 1.71
LDB1-201ENST00000361198 ARMCX5Q6P1M9 558 aa25.73■■□□□ 1.71
LDB1-201ENST00000361198 DPP8Q6V1X1 898 aaPredicted RBP25.73■■□□□ 1.71
LDB1-201ENST00000361198 MCM7P33993 719 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 FANCCQ00597 558 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 RASGRP4Q8TDF6 673 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 CEP95Q96GE4 821 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 CPVLQ9H3G5 476 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 SUGT1Q9Y2Z0 365 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 KLRF2D3W0D1 207 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 PDE6BP35913 854 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 SPATA20Q8TB22 786 aa25.72■■□□□ 1.71
LDB1-201ENST00000361198 MORC3Q14149 939 aa25.71■■□□□ 1.71
LDB1-201ENST00000361198 TMC6Q7Z403 805 aa25.71■■□□□ 1.71
LDB1-201ENST00000361198 ZNF592Q92610 1267 aa25.71■■□□□ 1.71
LDB1-201ENST00000361198 TRMT1Q9NXH9 659 aaKnown RBP25.71■■□□□ 1.71
LDB1-201ENST00000361198 TTF2Q9UNY4 1162 aaKnown RBP25.71■■□□□ 1.71
LDB1-201ENST00000361198 PARP3Q9Y6F1 533 aa25.71■■□□□ 1.71
LDB1-201ENST00000361198 COL11A2P13942 1736 aaPredicted RBP25.71■■□□□ 1.71
LDB1-201ENST00000361198 M0R2N6 131 aa25.71■■□□□ 1.71
LDB1-201ENST00000361198 E4F1Q66K89 784 aaPredicted RBP25.71■■□□□ 1.71
LDB1-201ENST00000361198 HEATR3Q7Z4Q2 680 aa25.71■■□□□ 1.71
LDB1-201ENST00000361198 SLFN14P0C7P3 912 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 MSL1Q68DK7 614 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 MASTLQ96GX5 879 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 FEZ1Q99689 392 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 DDX4Q9NQI0 724 aaKnown RBP25.7■■□□□ 1.7
LDB1-201ENST00000361198 FANCLQ9NW38 375 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 BARHL2Q9NY43 387 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 GOLGB1Q14789 3259 aaKnown RBP25.7■■□□□ 1.7
LDB1-201ENST00000361198 PSDA5PKW4 1024 aaPredicted RBP25.7■■□□□ 1.7
LDB1-201ENST00000361198 SFPQP23246 707 aaKnown RBP eCLIP25.7■■□□□ 1.7
LDB1-201ENST00000361198 IL17AQ16552 155 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 USP17L2Q6R6M4 530 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 LZTS2Q9BRK4 669 aa25.7■■□□□ 1.7
LDB1-201ENST00000361198 STXBP3O00186 592 aa25.69■■□□□ 1.7
LDB1-201ENST00000361198 AFMP43652 599 aa25.69■■□□□ 1.7
LDB1-201ENST00000361198 SH3RF1Q7Z6J0 888 aa25.69■■□□□ 1.7
LDB1-201ENST00000361198 TRIML1Q8N9V2 468 aa25.69■■□□□ 1.7
LDB1-201ENST00000361198 FLAD1Q8NFF5 587 aa25.69■■□□□ 1.7
LDB1-201ENST00000361198 KIF18AQ8NI77 898 aa25.69■■□□□ 1.7
LDB1-201ENST00000361198 PARP1P09874 1014 aaKnown RBP25.68■■□□□ 1.7
LDB1-201ENST00000361198 TOP1P11387 765 aaKnown RBP25.68■■□□□ 1.7
LDB1-201ENST00000361198 SCNN1DP51172 638 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 MLKLQ8NB16 471 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 PAGE5Q96GU1 130 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 SPZ1Q9BXG8 430 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 PCDHA6Q9UN73 950 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 PCDHA8Q9Y5H6 950 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 NOVP48745 357 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 CCDC148Q8NFR7 591 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 DPF2Q92785 391 aa25.68■■□□□ 1.7
LDB1-201ENST00000361198 CGNQ9P2M7 1197 aaKnown RBP25.68■■□□□ 1.7
LDB1-201ENST00000361198 MYO1BO43795 1136 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 CASP1P29466 404 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 CBX1P83916 185 aa25.67■■□□□ 1.7
LDB1-201ENST00000361198 GABPAQ06546 454 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms