RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MTMR7Q9Y216 660 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 POLR2AP24928 1970 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 H7C1D1 291 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 GUCY1B3Q02153 619 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 MIGA2Q7L4E1 593 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 STAG2Q8N3U4 1231 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 RGS22Q8NE09 1264 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 ZNF830Q96NB3 372 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 ALG1Q9BT22 464 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 FAM13BQ9NYF5 915 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 HERC5Q9UII4 1024 aaKnown RBP15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 CFAP45Q9UL16 551 aa15.15■□□□□ 0.02
SQSTM1-201ENST00000360718 RBM10P98175 930 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 TYRO3Q06418 890 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 SLC35G1Q2M3R5 365 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 LEO1Q8WVC0 666 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 SPTLC3Q9NUV7 552 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 hCG_1642624A0A1W2PR95 340 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 DEXIO95424 95 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 LIG1P18858 919 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 GNAQP50148 359 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 TNFAIP1Q13829 316 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 TMTC3Q6ZXV5 915 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 SIAH1Q8IUQ4 282 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 SRBD1Q8N5C6 995 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 MYRIPQ8NFW9 859 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 RNF26Q9BY78 433 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 TFIP11Q9UBB9 837 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-201ENST00000360718 CAVIN2O95810 425 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 SEPT2Q15019 361 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 ANGEL2Q5VTE6 544 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 FBXO18Q8NFZ0 1043 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 SOCS7O14512 581 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 TTLL1O95922 423 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 GRM4Q14833 912 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 CLSTN2Q9H4D0 955 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 CLIP2Q9UDT6 1046 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 MRVI1Q9Y6F6 885 aa15.13■□□□□ 0.01
SQSTM1-201ENST00000360718 CNTNAP5Q8WYK1 1306 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 GOLGA8HP0CJ92 632 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 CAMK4Q16566 473 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 BICD2Q8TD16 824 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 SHISA4Q96DD7 197 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 DEFB129Q9H1M3 183 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 GH2P01242 217 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 XBP1P17861 261 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 MAP3K10Q02779 954 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 PKN1Q16512 942 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 ABCB5Q2M3G0 1257 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 PRAMEF18Q5VWM3 479 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 USP17L2Q6R6M4 530 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 RBM43Q6ZSC3 357 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 ZMYND15Q9H091 742 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 CPVLQ9H3G5 476 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 GGA3Q9NZ52 723 aa15.12■□□□□ 0.01
SQSTM1-201ENST00000360718 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 USP17L5A8MUK1 530 aa15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 PRPF3O43395 683 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 EEF2P13639 858 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 RESTQ13127 1097 aa15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 CABP5Q9NP86 173 aa15.11■□□□□ 0.01
SQSTM1-201ENST00000360718 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 CYTH3O43739 400 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 TBC1D12O60347 775 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 PARP1P09874 1014 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 ATP2B2Q01814 1243 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 NBPF12Q5TAG4 269 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 ATL3Q6DD88 541 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 TMEM179Q6ZVK1 233 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 KIAA1524Q8TCG1 905 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 KANSL2Q9H9L4 492 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 V9GY48 417 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 AP5Z1O43299 807 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 PDHBP11177 359 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 GNL2Q13823 731 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 DLK2Q6UY11 383 aa15.1■□□□□ 0.01
SQSTM1-201ENST00000360718 PHF20L1A8MW92 1017 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 SAFBQ15424 915 aaKnown RBP eCLIP15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 ANO6Q4KMQ2 910 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 KRT40Q6A162 431 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 CKAP2LQ8IYA6 745 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 FZD1Q9UP38 647 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 A0A1W2PRG0 241 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 CTAGE5O15320 804 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 GRIN3BO60391 1043 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 SNHG28P0DPA3 235 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 ICA1Q05084 483 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 CBX8Q9HC52 389 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 ADARB2Q9NS39 739 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms