RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TMTC1Q8IUR5 882 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 GTPBP10A4D1E9 387 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 RAB44Q7Z6P3 723 aaPredicted RBP18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 NME9Q86XW9 330 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 SAR1BQ9Y6B6 198 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 IFNL2Q8IZJ0 200 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 SCOCQ9UIL1 159 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 ANXA1P04083 346 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 ACSBG1Q96GR2 724 aa18.97■□□□□ 0.63
CACNA1A-201ENST00000360228 GOLGA8KD6RF30 607 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 MTX1Q13505 466 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 PRPSAP1Q14558 356 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 RINT1Q6NUQ1 792 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 DHX32Q7L7V1 743 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 IGHDP01880 384 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 LIG3P49916 1009 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 RRAGAQ7L523 313 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 MYLK4Q86YV6 388 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 FAM8A1Q9UBU6 413 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 YWHAEP62258 255 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 ADAT2Q7Z6V5 191 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 PTPROQ16827 1216 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 NR1H4Q96RI1 486 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 FAM83GA6ND36 823 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 IVNS1ABPQ9Y6Y0 642 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 NEK2P51955 445 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 SNX1Q13596 522 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 DKC1O60832 514 aaKnown RBP eCLIP18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 SLF1Q9BQI6 1058 aa18.96■□□□□ 0.63
CACNA1A-201ENST00000360228 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 TRPC6Q9Y210 931 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 RNF113AO15541 343 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 ACBD5Q5T8D3 534 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 MYSM1Q5VVJ2 828 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 KIF9Q9HAQ2 790 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 IL15P40933 162 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 C16orf87Q6PH81 154 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 MMS19Q96T76 1030 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 CROCCQ5TZA2 2017 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 HERC4Q5GLZ8 1057 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 MCUQ8NE86 351 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 TEKT1Q969V4 418 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 SLC13A4Q9UKG4 626 aa18.95■□□□□ 0.62
CACNA1A-201ENST00000360228 KIF14Q15058 1648 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 ARHGDIAP52565 204 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 POSTNQ15063 836 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 FAM207AQ9NSI2 230 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 ATP6V1E2Q96A05 226 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 UBN1Q9NPG3 1134 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 FOXO3O43524 673 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 FGD5Q6ZNL6 1462 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 A0A1B0GW55 424 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DUX4L2P0CJ85 424 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DUX4L3P0CJ86 424 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DUX4L4P0CJ87 422 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DUX4L5P0CJ88 424 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DUX4L6P0CJ89 424 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DUX4L7P0CJ90 424 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 LSM14BQ9BX40 385 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DUX4Q9UBX2 424 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 ZYXQ15942 572 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 GJA3Q9Y6H8 435 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 OCM2P0CE71 109 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 OCMP0CE72 109 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 EMILIN1Q9Y6C2 1016 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 NONOQ15233 471 aaKnown RBP eCLIP18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 C17orf53Q8N3J3 647 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 INTUQ9ULD6 942 aa18.94■□□□□ 0.62
CACNA1A-201ENST00000360228 DYMQ7RTS9 669 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 MYRIPQ8NFW9 859 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 TAB2Q9NYJ8 693 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 FLOT2Q14254 428 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 GJC2Q5T442 439 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 TMCO5AQ8N6Q1 288 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 PGBD1Q96JS3 809 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 EFHD1Q9BUP0 239 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 ZNF202O95125 648 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 INHBAP08476 426 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 DAB2P98082 770 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 XAGE3Q8WTP9 111 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 DIABLOQ9NR28 239 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 ATF2P15336 505 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 MAGEA1P43355 309 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 ANGPTL8Q6UXH0 198 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 MAP7D3Q8IWC1 876 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 RDH13Q8NBN7 331 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 KRT80Q6KB66 452 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 CDKL2Q92772 493 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 MEIS3Q99687 375 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 NSFL1CQ9UNZ2 370 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 FIS1Q9Y3D6 152 aa18.93■□□□□ 0.62
CACNA1A-201ENST00000360228 SYNJ2BP-COX16A0A087WUM0 186 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 SUN1O94901 812 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 DEXIO95424 95 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 SLC4A1P02730 911 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 TBCCQ15814 346 aa18.92■□□□□ 0.62
CACNA1A-201ENST00000360228 COX16Q9P0S2 106 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms