RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CTAGE9A4FU28 777 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 TTC36A6NLP5 189 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 E7EVH7 732 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 TRIM66O15016 1216 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 SPTLC2O15270 562 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 PPIP5K2O43314 1243 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 RNF40O75150 1001 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 TCEA3O75764 348 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 HOXC9P31274 260 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 MAP2K2P36507 400 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 VSNL1P62760 191 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 ITGB3BPQ13352 177 aaPredicted RBP5.09□□□□□ -1.59
PTPN22-201ENST00000359785 SEPT2Q15019 361 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 CLUL1Q15846 466 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 CYP26C1Q6V0L0 522 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 RGS9BPQ6ZS82 235 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 MFN1Q8IWA4 741 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 DAGLBQ8NCG7 672 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 IL17REQ8NFR9 667 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 BICD1Q96G01 975 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 ABCB6Q9NP58 842 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 ABHD10Q9NUJ1 306 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 IFNKQ9P0W0 207 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 FAN1Q9Y2M0 1017 aa5.09□□□□□ -1.59
PTPN22-201ENST00000359785 BUB1BO60566 1050 aaPredicted RBP5.09□□□□□ -1.6
PTPN22-201ENST00000359785 CDKL5O76039 1030 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 SLC3A2P08195 630 aaKnown RBP5.09□□□□□ -1.6
PTPN22-201ENST00000359785 NUDT17P0C025 328 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 CCNB1P14635 433 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 SH3BGRP55822 239 aaPredicted RBP5.09□□□□□ -1.6
PTPN22-201ENST00000359785 RASA2Q15283 850 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 ZC3H12AQ5D1E8 599 aaKnown RBP5.09□□□□□ -1.6
PTPN22-201ENST00000359785 FAM228AQ86W67 206 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 NME9Q86XW9 330 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 RASGEF1CQ8N431 466 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 TMEM237Q96Q45 408 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 PHACTR1Q9C0D0 580 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 GDPD2Q9HCC8 539 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 ANKIB1Q9P2G1 1089 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 SLC4A7Q9Y6M7 1214 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 FAM169AQ9Y6X4 670 aa5.09□□□□□ -1.6
PTPN22-201ENST00000359785 NFASCO94856 1347 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 AFF2P51816 1311 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 FER1L6Q2WGJ9 1857 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 SMNDC1O75940 238 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 GFPT2O94808 682 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 GYPCP04921 128 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 GCLCP48506 637 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 DRG2P55039 364 aaKnown RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 SETQ01105 290 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 TMEM132EQ6IEE7 984 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 PIGWQ7Z7B1 504 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 RELL1Q8IUW5 271 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 RBM12BQ8IXT5 1001 aaKnown RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 LARGE2Q8N3Y3 721 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 DRAXINQ8NBI3 349 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 IP6K1Q92551 441 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 FERMT2Q96AC1 680 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 SGSM3Q96HU1 749 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 PDE11AQ9HCR9 933 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 DDX21Q9NR30 783 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 ATP8A2Q9NTI2 1148 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 MAN1B1Q9UKM7 699 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 A0A0A6YYK5 440 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 SSU72P8A0A1W2PR75 194 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 PPP1R3GB7ZBB8 358 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 O00370 1275 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 TRAPPC3O43617 180 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 FMNL1O95466 1100 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 NPEPPSP55786 919 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 NEXNQ0ZGT2 675 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 ARL6IP4Q66PJ3 421 aaKnown RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 RAD9BQ6WBX8 426 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 TOGARAM2Q6ZUX3 1019 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 UNC13DQ70J99 1090 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 ASRGL1Q7L266 308 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 LRRC43Q8N309 656 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 KCTD17Q8N5Z5 321 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 FSIP1Q8NA03 581 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 CCT6BQ92526 530 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 PHAXQ9H814 394 aaKnown RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 CNOT10Q9H9A5 744 aaKnown RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 STRN4Q9NRL3 753 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 CIDEBQ9UHD4 219 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 ECHS1P30084 290 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 MRPS25P82663 173 aaKnown RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 MAP2K1Q02750 393 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 PTGISQ16647 500 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 DAB2IPQ5VWQ8 1189 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 NUGGCQ68CJ6 796 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 PRPF40BQ6NWY9 871 aaKnown RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 MTHFD1LQ6UB35 978 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 APBB1IPQ7Z5R6 666 aaPredicted RBP5.08□□□□□ -1.6
PTPN22-201ENST00000359785 CADPS2Q86UW7 1296 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 CREG2Q8IUH2 290 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 SIL1Q9H173 461 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 NDST4Q9H3R1 872 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 FAM204AQ9H8W3 233 aa5.08□□□□□ -1.6
PTPN22-201ENST00000359785 INTUQ9ULD6 942 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms