RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 MTMR4Q9NYA4 1195 aa16.06■□□□□ 0.16
PDLIM5-203ENST00000359265 CNTNAP5Q8WYK1 1306 aa16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 DEXIO95424 95 aa16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 TTLL1O95922 423 aa16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 KIF23Q02241 960 aaPredicted RBP16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 DCPSQ96C86 337 aaKnown RBP16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 TMEM39BQ9GZU3 492 aa16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 DEFB129Q9H1M3 183 aa16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 ZSCAN16Q9H4T2 348 aaPredicted RBP16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 MKI67P46013 3256 aaKnown RBP16.05■□□□□ 0.16
PDLIM5-203ENST00000359265 TBC1D12O60347 775 aa16.04■□□□□ 0.16
PDLIM5-203ENST00000359265 TRIM29Q14134 588 aa16.04■□□□□ 0.16
PDLIM5-203ENST00000359265 ABCB5Q2M3G0 1257 aa16.04■□□□□ 0.16
PDLIM5-203ENST00000359265 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
PDLIM5-203ENST00000359265 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
PDLIM5-203ENST00000359265 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
PDLIM5-203ENST00000359265 ASTN2O75129 1339 aaPredicted RBP16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 PRPF3O43395 683 aaKnown RBP16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 PLEKHA8P1O95397 391 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 HUNKP57058 714 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 RESTQ13127 1097 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 FERMT3Q86UX7 667 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 LZTS2Q9BRK4 669 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 ANP32EQ9BTT0 268 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 KANSL2Q9H9L4 492 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 CABP5Q9NP86 173 aa16.03■□□□□ 0.16
PDLIM5-203ENST00000359265 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 PARP1P09874 1014 aaKnown RBP16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 SLURP2P0DP57 97 aa16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 GUCY1B3Q02153 619 aa16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 FUT2Q10981 343 aa16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 DCAF15Q66K64 600 aa16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 TEPSINQ96N21 525 aa16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 NYAP2Q9P242 653 aa16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 CLIP2Q9UDT6 1046 aa16.02■□□□□ 0.16
PDLIM5-203ENST00000359265 SZT2Q5T011 3432 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 GDF11O95390 407 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 XBP1P17861 261 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 ATP2B2Q01814 1243 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 ICA1Q05084 483 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 ASPRV1Q53RT3 343 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 CLEC10AQ8IUN9 316 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 LRRC47Q8N1G4 583 aaKnown RBP16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 SRBD1Q8N5C6 995 aaKnown RBP16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 AIFM3Q96NN9 605 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 MAD2L2Q9UI95 211 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 MTMR7Q9Y216 660 aa16.01■□□□□ 0.15
PDLIM5-203ENST00000359265 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
PDLIM5-203ENST00000359265 KRT85P78386 507 aa16■□□□□ 0.15
PDLIM5-203ENST00000359265 MAP3K10Q02779 954 aa16■□□□□ 0.15
PDLIM5-203ENST00000359265 SEPT2Q15019 361 aa16■□□□□ 0.15
PDLIM5-203ENST00000359265 FOXD4L6Q3SYB3 417 aaPredicted RBP16■□□□□ 0.15
PDLIM5-203ENST00000359265 SUPT20HL1Q3ZLR7 823 aa16■□□□□ 0.15
PDLIM5-203ENST00000359265 KRT40Q6A162 431 aa16■□□□□ 0.15
PDLIM5-203ENST00000359265 RGMBQ6NW40 437 aa16■□□□□ 0.15
PDLIM5-203ENST00000359265 FOXD4L3Q6VB84 417 aaPredicted RBP16■□□□□ 0.15
PDLIM5-203ENST00000359265 GH2P01242 217 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 PDHBP11177 359 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 SMARCA1P28370 1054 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 SAFBQ15424 915 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 OTUD7BQ6GQQ9 843 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 POTEHQ6S545 545 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 KRT26Q7Z3Y9 468 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 BRAPQ7Z569 592 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 MKL1Q969V6 931 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 CHAMP1Q96JM3 812 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 SPZ1Q9BXG8 430 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 SYNPO2Q9UMS6 1093 aa15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 COLQQ9Y215 455 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 V9GY48 417 aaPredicted RBP15.99■□□□□ 0.15
PDLIM5-203ENST00000359265 KLRF2D3W0D1 207 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 SNHG28P0DPA3 235 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 GUCY1A2P33402 732 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 NF2P35240 595 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 DNM1Q05193 864 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 GNL2Q13823 731 aaKnown RBP15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 SKOR2Q2VWA4 1001 aaPredicted RBP15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 ATL3Q6DD88 541 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 MIGA2Q7L4E1 593 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 USP48Q86UV5 1035 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 TMEM87AQ8NBN3 555 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 SLC17A8Q8NDX2 589 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 ZNF341Q9BYN7 854 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 ARHGEF10LQ9HCE6 1279 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 GINM1Q9NU53 330 aa15.98■□□□□ 0.15
PDLIM5-203ENST00000359265 ZBTB21Q9ULJ3 1066 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms