RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CACNB3P54284 484 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 ZNF445P59923 1031 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 RILPL1Q5EBL4 403 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 OTUD7BQ6GQQ9 843 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 CAVIN1Q6NZI2 390 aaKnown RBP15.55■□□□□ 0.08
CCDC197-201ENST00000359253 FAM173BQ6P4H8 233 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 NOSTRINQ8IVI9 506 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 CCDC82Q8N4S0 544 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 JMYQ8N9B5 988 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
CCDC197-201ENST00000359253 CHAMP1Q96JM3 812 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 AIFM3Q96NN9 605 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 CSRNP1Q96S65 589 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 PHF20Q9BVI0 1012 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 GINM1Q9NU53 330 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 MORC2Q9Y6X9 1032 aaPredicted RBP15.55■□□□□ 0.08
CCDC197-201ENST00000359253 GREB1LQ9C091 1923 aaPredicted RBP15.55■□□□□ 0.08
CCDC197-201ENST00000359253 MYH15Q9Y2K3 1946 aa15.55■□□□□ 0.08
CCDC197-201ENST00000359253 KLRF2D3W0D1 207 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 MPHOSPH10O00566 681 aaKnown RBP15.54■□□□□ 0.08
CCDC197-201ENST00000359253 GADD45BO75293 160 aaPredicted RBP15.54■□□□□ 0.08
CCDC197-201ENST00000359253 GUCY1A2P33402 732 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 KRT2P35908 639 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 MAP3K10Q02779 954 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 ABCB5Q2M3G0 1257 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 L1TD1Q5T7N2 865 aaKnown RBP15.54■□□□□ 0.08
CCDC197-201ENST00000359253 DIS3L2Q8IYB7 885 aaKnown RBP15.54■□□□□ 0.08
CCDC197-201ENST00000359253 CMTR1Q8N1G2 835 aaKnown RBP15.54■□□□□ 0.08
CCDC197-201ENST00000359253 CCDC148Q8NFR7 591 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 USP28Q96RU2 1077 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 GLIS2Q9BZE0 524 aaPredicted RBP15.54■□□□□ 0.08
CCDC197-201ENST00000359253 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 CLIP2Q9UDT6 1046 aa15.54■□□□□ 0.08
CCDC197-201ENST00000359253 TMEM88BA6NKF7 163 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 TCP10L2B9ZVM9 353 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 BMP15O95972 392 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 PDHBP11177 359 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 FKBP1BP68106 108 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 CCDC183Q5T5S1 534 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 ANO1Q5XXA6 986 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 LINC00301Q8NCQ3 95 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 DCAF4Q8WV16 495 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 HOOK2Q96ED9 719 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 GZF1Q9H116 711 aaPredicted RBP15.53■□□□□ 0.08
CCDC197-201ENST00000359253 DEFB129Q9H1M3 183 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCDC197-201ENST00000359253 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 CEP131Q9UPN4 1083 aa15.53■□□□□ 0.08
CCDC197-201ENST00000359253 CNTNAP1P78357 1384 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
CCDC197-201ENST00000359253 A0A1W2PQ27 194 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 A0A1W2PQ64 194 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 A0A1W2PQD8 194 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 PPP6R2O75170 966 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 STK38Q15208 465 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 SF3A1Q15459 793 aaKnown RBP15.52■□□□□ 0.08
CCDC197-201ENST00000359253 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 ADALQ6DHV7 355 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 STAG2Q8N3U4 1231 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 RRP36Q96EU6 259 aaKnown RBP15.52■□□□□ 0.08
CCDC197-201ENST00000359253 RIOX1Q9H6W3 641 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 VEZTQ9HBM0 779 aa15.52■□□□□ 0.08
CCDC197-201ENST00000359253 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.52■□□□□ 0.08
CCDC197-201ENST00000359253 DDX19AQ9NUU7 478 aaKnown RBP15.52■□□□□ 0.08
CCDC197-201ENST00000359253 MYH6P13533 1939 aa15.52■□□□□ 0.07
CCDC197-201ENST00000359253 SIPA1L1O43166 1804 aa15.52■□□□□ 0.07
CCDC197-201ENST00000359253 CLRN2A0PK11 232 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 GOLGA6L3A6NEY3 463 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 UNCXA6NJT0 531 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 BTBD18B2RXH4 712 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 KIF28PB7ZC32 967 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 SPTLC2O15270 562 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 NF2P35240 595 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 TRAPPC10P48553 1259 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 NLRP5P59047 1200 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 SLC39A14Q15043 492 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 ZSCAN23Q3MJ62 389 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 CST9Q5W186 159 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 DAGLBQ8NCG7 672 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 GMCL1P1Q8NEA9 526 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 GJB4Q9NTQ9 266 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 VPS54Q9P1Q0 977 aa15.51■□□□□ 0.07
CCDC197-201ENST00000359253 SEC63Q9UGP8 760 aaKnown RBP15.51■□□□□ 0.07
CCDC197-201ENST00000359253 NOL7Q9UMY1 257 aaKnown RBP15.51■□□□□ 0.07
CCDC197-201ENST00000359253 POLR2AP24928 1970 aaKnown RBP15.5■□□□□ 0.07
CCDC197-201ENST00000359253 ICA1Q05084 483 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 ZNF543Q08ER8 600 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 RASA3Q14644 834 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 C2orf69Q8N8R5 385 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 HHIPL1Q96JK4 782 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 BARHL2Q9NY43 387 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 KCNJ14Q9UNX9 436 aa15.5■□□□□ 0.07
CCDC197-201ENST00000359253 FSD2A1L4K1 749 aa15.49■□□□□ 0.07
CCDC197-201ENST00000359253 USP17L5A8MUK1 530 aa15.49■□□□□ 0.07
CCDC197-201ENST00000359253 TRAF5O00463 557 aa15.49■□□□□ 0.07
CCDC197-201ENST00000359253 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
CCDC197-201ENST00000359253 EEF2P13639 858 aaKnown RBP15.49■□□□□ 0.07
CCDC197-201ENST00000359253 GNA11P29992 359 aa15.49■□□□□ 0.07
CCDC197-201ENST00000359253 ME1P48163 572 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms