RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 HMGB1P1B2RPK0 211 aaPredicted RBP12.58□□□□□ -0.39
PSEN1-202ENST00000357710 EVI5O60447 810 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 DNAJC8O75937 253 aaPredicted RBP12.58□□□□□ -0.39
PSEN1-202ENST00000357710 GNPTABQ3T906 1256 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 NEK9Q8TD19 979 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 TEKT4Q8WW24 435 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 DNAJC25Q9H1X3 360 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 RABL2BQ9UNT1 228 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 SLIT2O94813 1529 aa12.58□□□□□ -0.39
PSEN1-202ENST00000357710 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 GOLGA8AA7E2F4 631 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 TRIM21P19474 475 aaKnown RBP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 NEK2P51955 445 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 CCDC73Q6ZRK6 1079 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 CCDC121Q6ZUS5 278 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 TRAPPC9Q96Q05 1148 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 NUP58Q9BVL2 599 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 MAK16Q9BXY0 300 aaKnown RBP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 AATFQ9NY61 560 aaKnown RBP eCLIP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 BZW2Q9Y6E2 419 aaKnown RBP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 ELL2O00472 640 aaPredicted RBP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 RAD21O60216 631 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 WDHD1O75717 1129 aaPredicted RBP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 KIF4AO95239 1232 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 ATP6V1G2O95670 118 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 BCRP11274 1271 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 TRIM27P14373 513 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 MRPS35P82673 323 aaKnown RBP12.58□□□□□ -0.4
PSEN1-202ENST00000357710 LONRF3Q496Y0 759 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 PPP1R15BQ5SWA1 713 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 KIFC2Q96AC6 838 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 ITM2BQ9Y287 266 aa12.58□□□□□ -0.4
PSEN1-202ENST00000357710 DISP2A7MBM2 1401 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 CAPN15O75808 1086 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 MYO1EQ12965 1108 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 DCAF5Q96JK2 942 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 AGBL1Q96MI9 1066 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 NAP1L3Q99457 506 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-202ENST00000357710 NOD2Q9HC29 1040 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-202ENST00000357710 DAAM1Q9Y4D1 1078 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 KIF5BP33176 963 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 KRT85P78386 507 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 LMNB2Q03252 620 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 STIM1Q13586 685 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 LACTB2Q53H82 288 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-202ENST00000357710 CMPK2Q5EBM0 449 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 RNF187Q5TA31 235 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-202ENST00000357710 PNKPQ96T60 521 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 GALNT8Q9NY28 637 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 CROTQ9UKG9 612 aa12.57□□□□□ -0.4
PSEN1-202ENST00000357710 IBSPP21815 317 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-202ENST00000357710 ACCSLQ4AC99 568 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
PSEN1-202ENST00000357710 CATIPQ7Z7H3 387 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 RSPH3Q86UC2 560 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 RSPH1Q8WYR4 309 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 TRIM11Q96F44 468 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 DMAP1Q9NPF5 467 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-202ENST00000357710 SLC5A4Q9NY91 659 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 VWA3AA6NCI4 1184 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 PALM3A6NDB9 673 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-202ENST00000357710 BTBD11A6QL63 1104 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 GHRP10912 638 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 CCNG1P51959 295 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 CBX3Q13185 183 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 C6orf89Q6UWU4 347 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■■■□□ 14.8
PSEN1-202ENST00000357710 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 ANO10Q9NW15 660 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 SAMM50Q9Y512 469 aa12.56□□□□□ -0.4
PSEN1-202ENST00000357710 MMEP08473 750 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 TROVE2P10155 538 aaKnown RBP eCLIP12.55□□□□□ -0.4
PSEN1-202ENST00000357710 EPB41P11171 864 aaKnown RBP12.55□□□□□ -0.4
PSEN1-202ENST00000357710 MXRA7P84157 204 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 KRT24Q2M2I5 525 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 NCCRP1Q6ZVX7 275 aaPredicted RBP12.55□□□□□ -0.4
PSEN1-202ENST00000357710 PEX5LQ8IYB4 626 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 TCHPQ9BT92 498 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 EXOC1Q9NV70 894 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 FANCGO15287 622 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 ARHGAP6O43182 974 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 PRC1O43663 620 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 ALOX15P16050 662 aaPredicted RBP12.55□□□□□ -0.4
PSEN1-202ENST00000357710 USP11P51784 963 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 GNG11P61952 73 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 PLEKHM2Q8IWE5 1019 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 LRRC43Q8N309 656 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 SMC1BQ8NDV3 1235 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 COG1Q8WTW3 980 aa12.55□□□□□ -0.4
PSEN1-202ENST00000357710 ZNF570Q96NI8 536 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms