RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 INF2Q27J81 1249 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 RILPL1Q5EBL4 403 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 PRMT6Q96LA8 375 aaPredicted RBP20.18■□□□□ 0.82
NPAS3-202ENST00000356141 KIAA1468Q9P260 1216 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 PARP1P09874 1014 aaKnown RBP20.18■□□□□ 0.82
NPAS3-202ENST00000356141 PTGDRQ13258 359 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 STX1AQ16623 288 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 RBM43Q6ZSC3 357 aaKnown RBP20.18■□□□□ 0.82
NPAS3-202ENST00000356141 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 JMYQ8N9B5 988 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 CNKSR1Q969H4 720 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 BRMS1Q9HCU9 246 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 MAST2Q6P0Q8 1798 aa20.18■□□□□ 0.82
NPAS3-202ENST00000356141 LAMB1P07942 1786 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 A0A087X0B3 334 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 CCDC96Q2M329 555 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 RBM26Q5T8P6 1007 aaKnown RBP20.17■□□□□ 0.82
NPAS3-202ENST00000356141 PODNQ7Z5L7 613 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 DNAJC18Q9H819 358 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 GRM4Q14833 912 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 TTC38Q5R3I4 469 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 ZSCAN30Q86W11 494 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 FOXP4Q8IVH2 680 aaPredicted RBP20.17■□□□□ 0.82
NPAS3-202ENST00000356141 NEDD1Q8NHV4 660 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 FAM163AQ96GL9 167 aaPredicted RBP20.17■□□□□ 0.82
NPAS3-202ENST00000356141 NUP88Q99567 741 aaPredicted RBP20.17■□□□□ 0.82
NPAS3-202ENST00000356141 MTA3Q9BTC8 594 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 MYH1P12882 1939 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 DDX60LQ5H9U9 1706 aaKnown RBP20.17■□□□□ 0.82
NPAS3-202ENST00000356141 PP2D1A8MPX8 630 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 NAPAP54920 295 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 JAKMIP3Q5VZ66 844 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 METTL16Q86W50 562 aaKnown RBP20.17■□□□□ 0.82
NPAS3-202ENST00000356141 VEZTQ9HBM0 779 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 TMEM260Q9NX78 707 aa20.17■□□□□ 0.82
NPAS3-202ENST00000356141 NID2Q14112 1375 aa20.16■□□□□ 0.82
NPAS3-202ENST00000356141 SHMT1P34896 483 aa20.16■□□□□ 0.82
NPAS3-202ENST00000356141 RESP18Q5W5W9 173 aa20.16■□□□□ 0.82
NPAS3-202ENST00000356141 SH3BP5LQ7L8J4 393 aa20.16■□□□□ 0.82
NPAS3-202ENST00000356141 BIN2Q9UBW5 565 aaPredicted RBP20.16■□□□□ 0.82
NPAS3-202ENST00000356141 FAM198AQ9UFP1 575 aa20.16■□□□□ 0.82
NPAS3-202ENST00000356141 CFAP100Q494V2 611 aa20.16■□□□□ 0.82
NPAS3-202ENST00000356141 STYK1Q6J9G0 422 aa20.16■□□□□ 0.82
NPAS3-202ENST00000356141 BBXQ8WY36 941 aaPredicted RBP20.16■□□□□ 0.82
NPAS3-202ENST00000356141 CDK5RAP2Q96SN8 1893 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 TNS1Q9HBL0 1735 aaKnown RBP20.15■□□□□ 0.82
NPAS3-202ENST00000356141 PSDA5PKW4 1024 aaPredicted RBP20.15■□□□□ 0.82
NPAS3-202ENST00000356141 PPP6R2O75170 966 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 PTGS1P23219 599 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 ARID5BQ14865 1188 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 CCDC84Q86UT8 332 aaPredicted RBP20.15■□□□□ 0.82
NPAS3-202ENST00000356141 SPICE1Q8N0Z3 855 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 ZNF287Q9HBT7 754 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 DHX40Q8IX18 779 aaKnown RBP20.15■□□□□ 0.82
NPAS3-202ENST00000356141 BLIDQ8IZY5 108 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 TTLL6Q8N841 843 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 C7orf43Q8WVR3 580 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 SYMPKQ92797 1274 aaKnown RBP20.15■□□□□ 0.82
NPAS3-202ENST00000356141 TRIM34Q9BYJ4 488 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 MTMR4Q9NYA4 1195 aa20.15■□□□□ 0.82
NPAS3-202ENST00000356141 CUTAO60888 179 aa20.14■□□□□ 0.82
NPAS3-202ENST00000356141 LMOD1P29536 600 aaPredicted RBP20.14■□□□□ 0.82
NPAS3-202ENST00000356141 LRMPQ12912 555 aa20.14■□□□□ 0.82
NPAS3-202ENST00000356141 IQCB1Q15051 598 aa20.14■□□□□ 0.82
NPAS3-202ENST00000356141 PCDHA5Q9Y5H7 936 aa20.14■□□□□ 0.82
NPAS3-202ENST00000356141 LTBP1Q14766 1721 aa20.14■□□□□ 0.81
NPAS3-202ENST00000356141 PSMD14O00487 310 aa20.14■□□□□ 0.81
NPAS3-202ENST00000356141 ZYXQ15942 572 aaKnown RBP20.14■□□□□ 0.81
NPAS3-202ENST00000356141 UVSSAQ2YD98 709 aa20.14■□□□□ 0.81
NPAS3-202ENST00000356141 GJA10Q969M2 543 aa20.14■□□□□ 0.81
NPAS3-202ENST00000356141 PRDM4Q9UKN5 801 aa20.14■□□□□ 0.81
NPAS3-202ENST00000356141 ROBO3Q96MS0 1386 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 HLA-DOAP06340 250 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 JAG1P78504 1218 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 STRIP1Q5VSL9 837 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 MIGA2Q7L4E1 593 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 TRMT44Q8IYL2 757 aaKnown RBP20.13■□□□□ 0.81
NPAS3-202ENST00000356141 SMYD4Q8IYR2 804 aaPredicted RBP20.13■□□□□ 0.81
NPAS3-202ENST00000356141 BLZF1Q9H2G9 400 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 ANO10Q9NW15 660 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 CCDC39Q9UFE4 941 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 PDHBP11177 359 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 PTPREP23469 700 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 RCAN1P53805 252 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 SEPT2Q15019 361 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 FILIP1Q7Z7B0 1213 aa20.13■□□□□ 0.81
NPAS3-202ENST00000356141 CCDC194A0A1B0GVG4 234 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 PALM3A6NDB9 673 aaPredicted RBP20.12■□□□□ 0.81
NPAS3-202ENST00000356141 CTAGE5O15320 804 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 TOP1P11387 765 aaKnown RBP20.12■□□□□ 0.81
NPAS3-202ENST00000356141 LETM2Q2VYF4 491 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 KRBA2Q6ZNG9 492 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 CEP57L1Q8IYX8 460 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 HPSEQ9Y251 543 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 PPP2R5BQ15173 497 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 IL17AQ16552 155 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 TNFRSF25Q93038 417 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 FAM13BQ9NYF5 915 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 SMCO2A6NFE2 343 aa20.12■□□□□ 0.81
NPAS3-202ENST00000356141 STXBP3O00186 592 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms