RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ATRIPQ8WXE1 791 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 ARPP21Q9UBL0 812 aaPredicted RBP13.75□□□□□ -0.21
COLCA1-201ENST00000355430 ZEB2O60315 1214 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 BRD3Q15059 726 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 IFI16Q16666 785 aaKnown RBP13.75□□□□□ -0.21
COLCA1-201ENST00000355430 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 CCNA1P78396 465 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 PPARAQ07869 468 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 PAGR1Q9BTK6 254 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 PHLPP2Q6ZVD8 1323 aa13.75□□□□□ -0.21
COLCA1-201ENST00000355430 DKC1O60832 514 aaKnown RBP eCLIP13.74□□□□□ -0.21
COLCA1-201ENST00000355430 COBLO75128 1261 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 PI16Q6UXB8 463 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 AIFM3Q96NN9 605 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 PUS7LQ9H0K6 701 aaKnown RBP13.74□□□□□ -0.21
COLCA1-201ENST00000355430 GJB4Q9NTQ9 266 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 CIAO1O76071 339 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 KIF4AO95239 1232 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 ATP1A3P13637 1013 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 GYG1P46976 350 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 IREB2P48200 963 aaKnown RBP13.74□□□□□ -0.21
COLCA1-201ENST00000355430 GRAPQ13588 217 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 GRAPLQ8TC17 118 aaPredicted RBP13.74□□□□□ -0.21
COLCA1-201ENST00000355430 PLCD4Q9BRC7 762 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 KRT79Q5XKE5 535 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 GRAMD1CQ8IYS0 662 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 STX10O60499 249 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 CLCN6P51797 869 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 SP4Q02446 784 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 ZSCAN26Q16670 478 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 FCHSD1Q86WN1 690 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 C2orf69Q8N8R5 385 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 GDAP1L1Q96MZ0 367 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 NCAPD2Q15021 1401 aa13.74□□□□□ -0.21
COLCA1-201ENST00000355430 RABEP2Q9H5N1 569 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 C21orf2O43822 256 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 OSBPP22059 807 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 VAV2P52735 878 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 MORC3Q14149 939 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 TRIML1Q8N9V2 468 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 SECISBP2LQ93073 1101 aaKnown RBP13.73□□□□□ -0.21
COLCA1-201ENST00000355430 SELENOOQ9BVL4 669 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
COLCA1-201ENST00000355430 DBNDD1Q9H9R9 158 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 KCNJ18B7U540 433 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 KCNJ12Q14500 433 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 FANCBQ8NB91 859 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 CEP170BQ9Y4F5 1589 aaPredicted RBP13.73□□□□□ -0.21
COLCA1-201ENST00000355430 NSMFQ6X4W1 530 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 SV2BQ7L1I2 683 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 CSRNP2Q9H175 543 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 MAN1B1Q9UKM7 699 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 M0QZ92 97 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
COLCA1-201ENST00000355430 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
COLCA1-201ENST00000355430 IQCA1LA6NCM1 817 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 GCOM1H8Y6P7 765 aaPredicted RBP13.72□□□□□ -0.21
COLCA1-201ENST00000355430 CCNT1O60563 726 aaKnown RBP13.72□□□□□ -0.21
COLCA1-201ENST00000355430 RAD17O75943 681 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 MYZAPP0CAP1 466 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 PHKA1P46020 1223 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 SPATA1Q5VX52 437 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
COLCA1-201ENST00000355430 GREM2Q9H772 168 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 BARGINQ6ZT62 677 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 VSTM4Q8IW00 320 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 SYMPKQ92797 1274 aaKnown RBP13.72□□□□□ -0.21
COLCA1-201ENST00000355430 PSMB7Q99436 277 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 KIDINS220Q9ULH0 1771 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 BTDP43251 543 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 FAM47AQ5JRC9 791 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 SPATA31A1Q5TZJ5 1347 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 GOLGA6CA6NDK9 693 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 LPXNO60711 386 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 GOLGA6DP0CG33 693 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 CFAP58Q5T655 872 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 IPO4Q8TEX9 1081 aaKnown RBP13.72□□□□□ -0.21
COLCA1-201ENST00000355430 SDR42E1Q8WUS8 393 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 LZTS2Q9BRK4 669 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 GOLGA6AQ9NYA3 693 aa13.72□□□□□ -0.21
COLCA1-201ENST00000355430 USP17L3A6NCW0 530 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 USP17L4A6NCW7 530 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 AZI2Q9H6S1 392 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 USP42Q9H9J4 1324 aaKnown RBP13.71□□□□□ -0.21
COLCA1-201ENST00000355430 FMNL1O95466 1100 aaPredicted RBP13.71□□□□□ -0.21
COLCA1-201ENST00000355430 ERCC3P19447 782 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 SH2B2O14492 632 aaPredicted RBP13.71□□□□□ -0.21
COLCA1-201ENST00000355430 CYP27B1O15528 508 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 CASP14P31944 242 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms