RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 IFI16Q16666 785 aaKnown RBP10.87□□□□□ -0.67
GABPA-201ENST00000354828 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 MRPL44Q9H9J2 332 aaKnown RBP10.87□□□□□ -0.67
GABPA-201ENST00000354828 PCDHA12Q9UN75 941 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 M0R2C6 588 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 CALUO43852 315 aaPredicted RBP10.87□□□□□ -0.67
GABPA-201ENST00000354828 STX10O60499 249 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 GCNT3O95395 438 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 CDK8P49336 464 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 EPHA10Q5JZY3 1008 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 SYDE2Q5VT97 1194 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 PLVAPQ9BX97 442 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 FAM196BA6NMK8 535 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 ERLIN1O75477 346 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 FAM160B2Q86V87 743 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 LRFN2Q9ULH4 789 aa10.87□□□□□ -0.67
GABPA-201ENST00000354828 EXOC3O60645 756 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 CSPG5O95196 566 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 HSPA4P34932 840 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 SPP2Q13103 211 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 TMX1Q9H3N1 280 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 CPS1P31327 1500 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 POLGP54098 1239 aaPredicted RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 FAM193AP78312 1265 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 ANO3Q9BYT9 981 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 PUS7LQ9H0K6 701 aaKnown RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 NT5C3AQ9H0P0 336 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 HOXC10Q9NYD6 342 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 ATP6V0A2Q9Y487 856 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 ELP1O95163 1332 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 JAK2O60674 1132 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 C8orf34Q49A92 452 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 ANO6Q4KMQ2 910 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 NEK8Q86SG6 692 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 TBC1D16Q8TBP0 767 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 DDX25Q9UHL0 483 aaKnown RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 KCNH3Q9ULD8 1083 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 CETN3O15182 167 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 CAMTA2O94983 1202 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 COL23A1Q86Y22 540 aaPredicted RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 SLFN12Q8IYM2 578 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 AOPEPQ8N6M6 819 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 TTC12Q9H892 705 aaPredicted RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 MAPK8IP1Q9UQF2 711 aa10.86□□□□□ -0.67
GABPA-201ENST00000354828 ZBTB12Q9Y330 459 aaPredicted RBP10.86□□□□□ -0.67
GABPA-201ENST00000354828 PRPF6O94906 941 aaKnown RBP10.85□□□□□ -0.67
GABPA-201ENST00000354828 PTGS1P23219 599 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 SSX2IPQ9Y2D8 614 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 POLR2DO15514 142 aaKnown RBP10.85□□□□□ -0.67
GABPA-201ENST00000354828 ZBTB24O43167 697 aaPredicted RBP10.85□□□□□ -0.67
GABPA-201ENST00000354828 MCAMP43121 646 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 GSDMDP57764 484 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 UBXN1Q04323 297 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 AKT3Q9Y243 479 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 TMEM110-MUSTN1A8MSY1 372 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 USP17L10C9JJH3 530 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 CYLC1P35663 651 aaPredicted RBP10.85□□□□□ -0.67
GABPA-201ENST00000354828 PPP1R2P41236 205 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 YARSP54577 528 aaKnown RBP10.85□□□□□ -0.67
GABPA-201ENST00000354828 DNAJC25Q9H1X3 360 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 MROH1Q8NDA8 1641 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 CPDO75976 1380 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 CCND2P30279 289 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 TECP42680 631 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 USP17L2Q6R6M4 530 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 NELFCDQ8IXH7 590 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
GABPA-201ENST00000354828 LRRIQ4A6NIV6 560 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 TNNI1P19237 187 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 LMNB1P20700 586 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 CASQ1P31415 396 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 ZNF274Q96GC6 653 aaPredicted RBP10.84□□□□□ -0.67
GABPA-201ENST00000354828 APOL6Q9BWW8 343 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 HUNKP57058 714 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 PTPN14Q15678 1187 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 C9orf131Q5VYM1 1079 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 STYK1Q6J9G0 422 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 TRMT1Q9NXH9 659 aaKnown RBP10.84□□□□□ -0.67
GABPA-201ENST00000354828 CD163L1Q9NR16 1453 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 CNTNAP4Q9C0A0 1308 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 CD19P15391 556 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 TAF1CQ15572 869 aaPredicted RBP10.84□□□□□ -0.67
GABPA-201ENST00000354828 GALNT17Q6IS24 598 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 FAM173BQ6P4H8 233 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 PNMA8AQ86V59 439 aaPredicted RBP10.84□□□□□ -0.67
GABPA-201ENST00000354828 SESTD1Q86VW0 696 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 RAET1EQ8TD07 263 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 CDHR1Q96JP9 859 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 RPS6KC1Q96S38 1066 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 PIGSQ96S52 555 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
GABPA-201ENST00000354828 MYO3AQ8NEV4 1616 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 KDM3AQ9Y4C1 1321 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 CUTAO60888 179 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 URI1O94763 535 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms