RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 AIFM3Q96NN9 605 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
TRAF3-202ENST00000351691 GGA2Q9UJY4 613 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 SRPRBQ9Y5M8 271 aaKnown RBP16.78■□□□□ 0.28
TRAF3-202ENST00000351691 DISP2A7MBM2 1401 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 CHUKO15111 745 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 PDE8AO60658 829 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 ITIH3Q06033 890 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 RILPL1Q5EBL4 403 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 ALS2CLQ60I27 953 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 CCDC70Q6NSX1 233 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 CNNM1Q9NRU3 951 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
TRAF3-202ENST00000351691 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
TRAF3-202ENST00000351691 KIAA0754O94854 1291 aa16.77■□□□□ 0.28
TRAF3-202ENST00000351691 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.28
TRAF3-202ENST00000351691 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
TRAF3-202ENST00000351691 VGLL2Q8N8G2 317 aa16.77■□□□□ 0.28
TRAF3-202ENST00000351691 GSDMAQ96QA5 445 aa16.77■□□□□ 0.28
TRAF3-202ENST00000351691 EPN1Q9Y6I3 576 aaPredicted RBP16.77■□□□□ 0.28
TRAF3-202ENST00000351691 BCL9O00512 1426 aa16.77■□□□□ 0.28
TRAF3-202ENST00000351691 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.77■□□□□ 0.27
TRAF3-202ENST00000351691 IRS4O14654 1257 aaPredicted RBP16.77■□□□□ 0.27
TRAF3-202ENST00000351691 MEFVO15553 781 aaPredicted RBP16.77■□□□□ 0.27
TRAF3-202ENST00000351691 NDUFA10O95299 355 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 ARID4AP29374 1257 aaPredicted RBP16.77■□□□□ 0.27
TRAF3-202ENST00000351691 IARSP41252 1262 aaKnown RBP16.77■□□□□ 0.27
TRAF3-202ENST00000351691 MCAMP43121 646 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 HAND2P61296 217 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 ALX1Q15699 326 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 NTRK3Q16288 839 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 ZNF572Q7Z3I7 529 aaPredicted RBP16.77■□□□□ 0.27
TRAF3-202ENST00000351691 MMGT1Q8N4V1 131 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 CAPN7Q9Y6W3 813 aa16.77■□□□□ 0.27
TRAF3-202ENST00000351691 LRP5O75197 1615 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 SRRM3A6NNA2 597 aaPredicted RBP16.76■□□□□ 0.27
TRAF3-202ENST00000351691 NEDD9Q14511 834 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 EMC10Q5UCC4 262 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 OTUD6BQ8N6M0 293 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 CERKQ8TCT0 537 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 SLF1Q9BQI6 1058 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 FOXP1Q9H334 677 aaPredicted RBP16.76■□□□□ 0.27
TRAF3-202ENST00000351691 GREM2Q9H772 168 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 REXO2Q9Y3B8 237 aaKnown RBP16.76■□□□□ 0.27
TRAF3-202ENST00000351691 PDE8BO95263 885 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 TOB1P50616 345 aaPredicted RBP16.76■□□□□ 0.27
TRAF3-202ENST00000351691 HLFQ16534 295 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 TMEM87BQ96K49 555 aa16.76■□□□□ 0.27
TRAF3-202ENST00000351691 NID2Q14112 1375 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 NUP98P52948 1817 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 PPP1R3GB7ZBB8 358 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 DRP2Q13474 957 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRAF3-202ENST00000351691 PREPLQ4J6C6 727 aaPredicted RBP16.75■□□□□ 0.27
TRAF3-202ENST00000351691 APOA5Q6Q788 366 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 GIMAP7Q8NHV1 300 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 MCM8Q9UJA3 840 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 UBN2Q6ZU65 1347 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 MROH5Q6ZUA9 1318 aa16.75■□□□□ 0.27
TRAF3-202ENST00000351691 ATP1A1P05023 1023 aaKnown RBP16.74■□□□□ 0.27
TRAF3-202ENST00000351691 CD44P16070 742 aaKnown RBP16.74■□□□□ 0.27
TRAF3-202ENST00000351691 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-202ENST00000351691 KRT83P78385 493 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 RAB11FIP4Q86YS3 637 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 ANKRD18AQ8IVF6 992 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-202ENST00000351691 NUP88Q99567 741 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-202ENST00000351691 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRAF3-202ENST00000351691 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
TRAF3-202ENST00000351691 GUCA1BQ9UMX6 200 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 MMP1P03956 469 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 TNFRSF8P28908 595 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 KRT9P35527 623 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 SATB1Q01826 763 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 KRT31Q15323 416 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 SPECC1Q5M775 1068 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 GRAMD1CQ8IYS0 662 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 CEP120Q8N960 986 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 LPIN2Q92539 896 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 JAKMIP2Q96AA8 810 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 SEC31BQ9NQW1 1179 aa16.74■□□□□ 0.27
TRAF3-202ENST00000351691 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
TRAF3-202ENST00000351691 MYBL2P10244 700 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 RDXP35241 583 aaKnown RBP16.73■□□□□ 0.27
TRAF3-202ENST00000351691 COPB1P53618 953 aaKnown RBP16.73■□□□□ 0.27
TRAF3-202ENST00000351691 SMTNP53814 917 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 APBA1Q02410 837 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 SSRP1Q08945 709 aaKnown RBP16.73■□□□□ 0.27
TRAF3-202ENST00000351691 NNTQ13423 1086 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 WLSQ5T9L3 541 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 NDUFAB1O14561 156 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 N4BP3O15049 544 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 ZBTB43O43298 467 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 FGFR2P21802 821 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 GRIN1Q05586 938 aa16.73■□□□□ 0.27
TRAF3-202ENST00000351691 DPYDQ12882 1025 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms