RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PTPREP23469 700 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 CCNA1P78396 465 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 PPARAQ07869 468 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 MAP2K5Q13163 448 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 NMIQ13287 307 aaPredicted RBP17.2■□□□□ 0.34
HMGN3-202ENST00000344726 GRB14Q14449 540 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 ZNF589Q86UQ0 364 aaPredicted RBP17.2■□□□□ 0.34
HMGN3-202ENST00000344726 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
HMGN3-202ENST00000344726 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 FBXO28Q9NVF7 368 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 FRMPD3Q5JV73 1810 aa17.19■□□□□ 0.34
HMGN3-202ENST00000344726 WDR46O15213 610 aaKnown RBP17.19■□□□□ 0.34
HMGN3-202ENST00000344726 FLOT1O75955 427 aa17.19■□□□□ 0.34
HMGN3-202ENST00000344726 PDE4AP27815 886 aa17.19■□□□□ 0.34
HMGN3-202ENST00000344726 CCND3P30281 292 aaPredicted RBP17.19■□□□□ 0.34
HMGN3-202ENST00000344726 NPLOC4Q8TAT6 608 aa17.19■□□□□ 0.34
HMGN3-202ENST00000344726 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
HMGN3-202ENST00000344726 HMX1Q9NP08 348 aaPredicted RBP17.19■□□□□ 0.34
HMGN3-202ENST00000344726 INCENPQ9NQS7 918 aa17.19■□□□□ 0.34
HMGN3-202ENST00000344726 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
HMGN3-202ENST00000344726 SLC15A5A6NIM6 579 aa17.18■□□□□ 0.34
HMGN3-202ENST00000344726 IGHA2P01877 340 aa17.18■□□□□ 0.34
HMGN3-202ENST00000344726 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
HMGN3-202ENST00000344726 MCMDC2Q4G0Z9 681 aa17.18■□□□□ 0.34
HMGN3-202ENST00000344726 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
HMGN3-202ENST00000344726 ZNF444Q8N0Y2 327 aaPredicted RBP17.18■□□□□ 0.34
HMGN3-202ENST00000344726 PAWRQ96IZ0 340 aaKnown RBP17.18■□□□□ 0.34
HMGN3-202ENST00000344726 NUP88Q99567 741 aaPredicted RBP17.18■□□□□ 0.34
HMGN3-202ENST00000344726 NYAP2Q9P242 653 aa17.18■□□□□ 0.34
HMGN3-202ENST00000344726 ADAMTS5Q9UNA0 930 aa17.18■□□□□ 0.34
HMGN3-202ENST00000344726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.18■□□□□ 0.34
HMGN3-202ENST00000344726 PLIN4Q96Q06 1357 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 HOXC6P09630 235 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 ERCC3P19447 782 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 SDSP20132 328 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 FAM47AQ5JRC9 791 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 FAM83BQ5T0W9 1011 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 DPF3Q92784 378 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 CEP95Q96GE4 821 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 CWC22Q9HCG8 908 aaKnown RBP17.17■□□□□ 0.34
HMGN3-202ENST00000344726 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
HMGN3-202ENST00000344726 RANBP2P49792 3224 aaKnown RBP17.16■□□□□ 0.34
HMGN3-202ENST00000344726 HSPD1P10809 573 aaKnown RBP17.16■□□□□ 0.34
HMGN3-202ENST00000344726 PDE4BQ07343 736 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 ALX1Q15699 326 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 HABP4Q5JVS0 413 aaKnown RBP17.16■□□□□ 0.34
HMGN3-202ENST00000344726 LHX8Q68G74 356 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 TRMT44Q8IYL2 757 aaKnown RBP17.16■□□□□ 0.34
HMGN3-202ENST00000344726 SHCBP1Q8NEM2 672 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 REPS2Q8NFH8 660 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 NEDD1Q8NHV4 660 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 ZNF287Q9HBT7 754 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 MTMR4Q9NYA4 1195 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 CLIP2Q9UDT6 1046 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 ANAPC4Q9UJX5 808 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 OGDHLQ9ULD0 1010 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
HMGN3-202ENST00000344726 LAMA4Q16363 1823 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 DNAH12Q6ZR08 3092 aa17.16■□□□□ 0.34
HMGN3-202ENST00000344726 RAD21O60216 631 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 COBLO75128 1261 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 NDUFB10O96000 172 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 FGAP02671 866 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 ADORA2AP29274 412 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 TFAP4Q01664 338 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 PLS1Q14651 629 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 MB21D1Q8N884 522 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 TRPV1Q8NER1 839 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 MKL1Q969V6 931 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 HTATIP2Q9BUP3 242 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 IVNS1ABPQ9Y6Y0 642 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
HMGN3-202ENST00000344726 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 F5H6K3 240 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 VWA5AO00534 786 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 SLC3A2P08195 630 aaKnown RBP17.14■□□□□ 0.33
HMGN3-202ENST00000344726 TSPY3P0CV98 308 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 TSPY8P0CW00 308 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 CYP2C19P33261 490 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 KLRC3Q07444 240 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 NCAPG2Q86XI2 1143 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 LRRC47Q8N1G4 583 aaKnown RBP17.14■□□□□ 0.33
HMGN3-202ENST00000344726 ANKLE1Q8NAG6 615 aa17.14■□□□□ 0.33
HMGN3-202ENST00000344726 ZNF214Q9UL59 606 aaPredicted RBP17.14■□□□□ 0.33
HMGN3-202ENST00000344726 TTLL1O95922 423 aa17.13■□□□□ 0.33
HMGN3-202ENST00000344726 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
HMGN3-202ENST00000344726 NBPF3Q9H094 633 aa17.13■□□□□ 0.33
HMGN3-202ENST00000344726 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
HMGN3-202ENST00000344726 PFASO15067 1338 aa17.13■□□□□ 0.33
HMGN3-202ENST00000344726 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
HMGN3-202ENST00000344726 NMT2O60551 498 aa17.12■□□□□ 0.33
HMGN3-202ENST00000344726 FGRP09769 529 aa17.12■□□□□ 0.33
HMGN3-202ENST00000344726 CAPN2P17655 700 aa17.12■□□□□ 0.33
HMGN3-202ENST00000344726 CWC27Q6UX04 472 aaKnown RBP17.12■□□□□ 0.33
HMGN3-202ENST00000344726 NECAB2Q7Z6G3 386 aa17.12■□□□□ 0.33
HMGN3-202ENST00000344726 MROH8Q9H579 483 aa17.12■□□□□ 0.33
HMGN3-202ENST00000344726 PCDH10Q9P2E7 1040 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms