RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 PRAMEF19Q5SWL8 479 aa24.08■■□□□ 1.44
KCNQ2-201ENST00000344425 FAM109BQ6ICB4 259 aaPredicted RBP24.08■■□□□ 1.44
KCNQ2-201ENST00000344425 GOPCQ9HD26 462 aa24.08■■□□□ 1.44
KCNQ2-201ENST00000344425 NRBP1Q9UHY1 535 aa24.08■■□□□ 1.44
KCNQ2-201ENST00000344425 RLFQ13129 1914 aa24.07■■□□□ 1.44
KCNQ2-201ENST00000344425 CYP2D7A0A087X1C5 515 aa24.07■■□□□ 1.44
KCNQ2-201ENST00000344425 ADAMTS5Q9UNA0 930 aa24.07■■□□□ 1.44
KCNQ2-201ENST00000344425 POTEB2H3BUK9 544 aa24.06■■□□□ 1.44
KCNQ2-201ENST00000344425 MMP19Q99542 508 aa24.06■■□□□ 1.44
KCNQ2-201ENST00000344425 A0A0C4DFX4 3053 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 COPB2P35606 906 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 ADCYAP1R1P41586 468 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 KCTD2Q14681 263 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 LRRC41Q15345 812 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 DIEXFQ68CQ4 756 aaKnown RBP24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 CTR9Q6PD62 1173 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 RIOX2Q8IUF8 465 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 MYH8P13535 1937 aa24.05■■□□□ 1.44
KCNQ2-201ENST00000344425 SMIM22K7EJ46 135 aa24.04■■□□□ 1.44
KCNQ2-201ENST00000344425 STAT3P40763 770 aa24.04■■□□□ 1.44
KCNQ2-201ENST00000344425 SNX17Q15036 470 aa24.04■■□□□ 1.44
KCNQ2-201ENST00000344425 LRRCC1Q9C099 1032 aa24.04■■□□□ 1.44
KCNQ2-201ENST00000344425 PRDM5Q9NQX1 630 aaPredicted RBP24.04■■□□□ 1.44
KCNQ2-201ENST00000344425 ARPP21Q9UBL0 812 aaPredicted RBP24.04■■□□□ 1.44
KCNQ2-201ENST00000344425 DIS3Q9Y2L1 958 aaKnown RBP24.04■■□□□ 1.44
KCNQ2-201ENST00000344425 VWA5AO00534 786 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 RAD21O60216 631 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 RARBP10826 455 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 TRIM60Q495X7 471 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 FAM47AQ5JRC9 791 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 C1orf53Q5VUE5 145 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 PUS7LQ9H0K6 701 aaKnown RBP24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 FBXO28Q9NVF7 368 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 PPP1R9AQ9ULJ8 1098 aa24.03■■□□□ 1.44
KCNQ2-201ENST00000344425 BAZ2AQ9UIF9 1905 aaKnown RBP24.02■■□□□ 1.44
KCNQ2-201ENST00000344425 CHGBP05060 677 aa24.02■■□□□ 1.44
KCNQ2-201ENST00000344425 FERMT2Q96AC1 680 aa24.02■■□□□ 1.44
KCNQ2-201ENST00000344425 TINF2Q9BSI4 451 aa24.02■■□□□ 1.44
KCNQ2-201ENST00000344425 XPNPEP3Q9NQH7 507 aa24.02■■□□□ 1.44
KCNQ2-201ENST00000344425 PGK2P07205 417 aa24.01■■□□□ 1.43
KCNQ2-201ENST00000344425 FAM83BQ5T0W9 1011 aa24.01■■□□□ 1.43
KCNQ2-201ENST00000344425 RNF180Q86T96 592 aa24.01■■□□□ 1.43
KCNQ2-201ENST00000344425 ZNF792Q3KQV3 632 aa24.01■■□□□ 1.43
KCNQ2-201ENST00000344425 ZNF697Q5TEC3 545 aa24.01■■□□□ 1.43
KCNQ2-201ENST00000344425 BADQ92934 168 aa24.01■■□□□ 1.43
KCNQ2-201ENST00000344425 PDLIM7Q9NR12 457 aa24.01■■□□□ 1.43
KCNQ2-201ENST00000344425 SHHQ15465 462 aa24■■□□□ 1.43
KCNQ2-201ENST00000344425 SBK1Q52WX2 424 aa24■■□□□ 1.43
KCNQ2-201ENST00000344425 MKNK2Q9HBH9 465 aa24■■□□□ 1.43
KCNQ2-201ENST00000344425 ZNF214Q9UL59 606 aaPredicted RBP24■■□□□ 1.43
KCNQ2-201ENST00000344425 PHF24Q9UPV7 400 aa24■■□□□ 1.43
KCNQ2-201ENST00000344425 GIMAP6Q6P9H5 292 aa23.99■■□□□ 1.43
KCNQ2-201ENST00000344425 GUCD1Q96NT3 240 aa23.99■■□□□ 1.43
KCNQ2-201ENST00000344425 STRBPQ96SI9 672 aaKnown RBP23.99■■□□□ 1.43
KCNQ2-201ENST00000344425 ECHDC1Q9NTX5 307 aa23.99■■□□□ 1.43
KCNQ2-201ENST00000344425 CNPY2Q9Y2B0 182 aa23.99■■□□□ 1.43
KCNQ2-201ENST00000344425 TACC3Q9Y6A5 838 aa23.99■■□□□ 1.43
KCNQ2-201ENST00000344425 AKR1A1P14550 325 aa23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 TLE2Q04725 743 aa23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 REPS2Q8NFH8 660 aa23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 FAM161BQ96MY7 647 aa23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 SLF1Q9BQI6 1058 aa23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 NYAP2Q9P242 653 aa23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
KCNQ2-201ENST00000344425 PARP14Q460N5 1801 aa23.97■■□□□ 1.43
KCNQ2-201ENST00000344425 ZNFX1Q9P2E3 1918 aaKnown RBP23.97■■□□□ 1.43
KCNQ2-201ENST00000344425 SMARCA5O60264 1052 aaPredicted RBP23.97■■□□□ 1.43
KCNQ2-201ENST00000344425 MSL3Q8N5Y2 521 aaKnown RBP23.97■■□□□ 1.43
KCNQ2-201ENST00000344425 TEX13BQ9BXU2 312 aa23.97■■□□□ 1.43
KCNQ2-201ENST00000344425 LAMA2P24043 3122 aaKnown RBP23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 TRIM43BA6NCK2 446 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 PGK1P00558 417 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 ZNF865P0CJ78 1059 aaPredicted RBP23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 RASA1P20936 1047 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 C9orf50Q5SZB4 431 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 SH3RF1Q7Z6J0 888 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 TRIM43Q96BQ3 446 aaPredicted RBP23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 DDX11Q96FC9 970 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 GPATCH3Q96I76 525 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 ROBO3Q96MS0 1386 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 LTBP2Q14767 1821 aa23.96■■□□□ 1.43
KCNQ2-201ENST00000344425 MYH7P12883 1935 aa23.95■■□□□ 1.43
KCNQ2-201ENST00000344425 GSG1L2A8MUP6 293 aa23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 MINDY4BA8MYZ0 360 aa23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 F5H6K3 240 aa23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 CLTBP09497 229 aa23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 TAL1P17542 331 aaPredicted RBP23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 KLRC3Q07444 240 aa23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 KBTBD3Q8NAB2 608 aa23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 PRPF38AQ8NAV1 312 aaKnown RBP23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 ZNF287Q9HBT7 754 aa23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 CTDP1Q9Y5B0 961 aaPredicted RBP23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 COL11A1P12107 1806 aaPredicted RBP23.95■■□□□ 1.42
KCNQ2-201ENST00000344425 SMAD3P84022 425 aaKnown RBP23.94■■□□□ 1.42
KCNQ2-201ENST00000344425 SNRNP48Q6IEG0 339 aaKnown RBP23.94■■□□□ 1.42
KCNQ2-201ENST00000344425 STK11IPQ8N1F8 1099 aa23.94■■□□□ 1.42
KCNQ2-201ENST00000344425 APPBP2Q92624 585 aa23.94■■□□□ 1.42
KCNQ2-201ENST00000344425 NUP88Q99567 741 aaPredicted RBP23.94■■□□□ 1.42
KCNQ2-201ENST00000344425 TSEN34Q9BSV6 310 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms