RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GNG11P61952 73 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 GSTTP1A0A1W2PQM5 241 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 COBLO75128 1261 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 NPTXRO95502 500 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 SKIV2L2P42285 1042 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CHMP4BP1P59074 171 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 COX10Q12887 443 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CARD9Q9H257 536 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CROTQ9UKG9 612 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 VCLP18206 1134 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 HDAC4P56524 1084 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ARHGAP27Q6ZUM4 889 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 H7C0S8 307 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 APOEP02649 317 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CASP14P31944 242 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 PPP1R2P41236 205 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 C16orf87Q6PH81 154 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 AFG1LQ8WV93 481 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 MTERF3Q96E29 417 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 COQ7Q99807 217 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM8Q9BZR9 551 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 HYOU1Q9Y4L1 999 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CETN1Q12798 172 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 EZH1Q92800 747 aaPredicted RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 E7EVH7 732 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 ADCY3O60266 1144 aa4.14□□□□□ -1.75
SYNE2-202ENST00000344113 DCTN2Q13561 401 aaKnown RBP4.14□□□□□ -1.75
SYNE2-202ENST00000344113 CA8P35219 290 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 FOSBP53539 338 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 USP37Q86T82 979 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 IL17RAQ96F46 866 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 STOML1Q9UBI4 398 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 MARCH6O60337 910 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 SCP2P22307 547 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 AFMP43652 599 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 PRIM1P49642 420 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 PAK2Q13177 524 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 SYTL4Q96C24 671 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ATXN10Q9UBB4 475 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 OSBPL5Q9H0X9 879 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 GAPVD1Q14C86 1478 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 PTPDC1A2A3K4 754 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC93Q567U6 631 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ZBED2Q9BTP6 218 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 SSH2Q76I76 1423 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 MROH7-TTC4A0A0A0MT08 1334 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 FAM25AB3EWG3 89 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 FAM25CB3EWG5 89 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 FAM25GB3EWG6 89 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CLPPQ16740 277 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 GINS4Q9BRT9 223 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CD209Q9NNX6 404 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 EPB41P11171 864 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CAPS2Q9BXY5 557 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 DNAJC12Q9UKB3 198 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 RHOBTB1O94844 696 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 SNX16P57768 344 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC184Q52MB2 194 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 HDDC2Q7Z4H3 204 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ARL10Q8N8L6 244 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 RHOBTB2Q9BYZ6 727 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC90BQ9GZT6 254 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 APOBEC2Q9Y235 224 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 S100A5P33763 92 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 SERPINB10P48595 397 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ALDH18A1P54886 795 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 UAP1Q16222 522 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 GSTA3Q16772 222 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 PNMA8AQ86V59 439 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ANKRD44Q8N8A2 993 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 KLC4Q9NSK0 619 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 STOML2Q9UJZ1 356 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ABCC9O60706 1549 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CHGBP05060 677 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 TNNC1P63316 161 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 DAB2IPQ5VWQ8 1189 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CNTROBQ8N137 903 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 BPIFA3Q9BQP9 254 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ATAD3AQ9NVI7 634 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CHGAP10645 457 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 EIF3BP55884 814 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 KIF17Q9P2E2 1029 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 hCG_2014768A0A024R1R8 64 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 STX10O60499 249 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 PYGMP11217 842 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 CYLC1P35663 651 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 SPDYAQ5MJ70 313 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ADCK1Q86TW2 530 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 OR8K1Q8NGG5 319 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 DTX3LQ8TDB6 740 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 BMP2KQ9NSY1 1161 aaPredicted RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 FBXL5Q9UKA1 691 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 TLK1Q9UKI8 766 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 SH3GLB1Q9Y371 365 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 TTLL3Q9Y4R7 772 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 ALDH1B1P30837 517 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 RUNDC3AQ59EK9 446 aa4.13□□□□□ -1.75
SYNE2-202ENST00000344113 WDR75Q8IWA0 830 aaKnown RBP4.13□□□□□ -1.75
SYNE2-202ENST00000344113 PFDN4Q9NQP4 134 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms