RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 MAPKAPK5Q8IW41 473 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 FANCLQ9NW38 375 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 USP21Q9UK80 565 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 ODF2LQ9ULJ1 636 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 LAMB4A4D0S4 1761 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 VWA3AA6NCI4 1184 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 TMEM232C9JQI7 657 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 ADAMTS3O15072 1205 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 CMA1P23946 247 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 MCM7P33993 719 aa13.7□□□□□ -0.22
TMEM220-201ENST00000341871 CLNS1AP54105 237 aaKnown RBP13.7□□□□□ -0.22
TMEM220-201ENST00000341871 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
TMEM220-201ENST00000341871 FOXP4Q8IVH2 680 aaPredicted RBP13.7□□□□□ -0.22
TMEM220-201ENST00000341871 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
TMEM220-201ENST00000341871 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
TMEM220-201ENST00000341871 RNF41Q9H4P4 317 aaPredicted RBP13.7□□□□□ -0.22
TMEM220-201ENST00000341871 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 FMNL1O95466 1100 aaPredicted RBP13.69□□□□□ -0.22
TMEM220-201ENST00000341871 MMP1P03956 469 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 TPTE2Q6XPS3 522 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 PIK3AP1Q6ZUJ8 805 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
TMEM220-201ENST00000341871 SMARCC1Q92922 1105 aaPredicted RBP13.69□□□□□ -0.22
TMEM220-201ENST00000341871 CSRNP2Q9H175 543 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 NUP188Q5SRE5 1749 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 DISP2A7MBM2 1401 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 KLHL33A6NCF5 533 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 USP17L3A6NCW0 530 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 USP17L4A6NCW7 530 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 NEMFO60524 1076 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 AP1G2O75843 785 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 PDE4BQ07343 736 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 OLFM4Q6UX06 510 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 USP17L1Q7RTZ2 530 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 METTL16Q86W50 562 aaKnown RBP13.69□□□□□ -0.22
TMEM220-201ENST00000341871 OTUD6BQ8N6M0 293 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 TBC1D22AQ8WUA7 517 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 TGFBRAP1Q8WUH2 860 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 KAT2BQ92831 832 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 TAF1P21675 1872 aa13.69□□□□□ -0.22
TMEM220-201ENST00000341871 PES1O00541 588 aaKnown RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 UBASH3AP57075 661 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 IRX1P78414 480 aaPredicted RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 STAG1Q8WVM7 1258 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 ITFG2Q969R8 447 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 SPATS2LQ9NUQ6 558 aaKnown RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 BSDC1Q9NW68 430 aaPredicted RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 PSD3Q9NYI0 1048 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 COL4A1P02462 1669 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 EIF3JO75822 258 aaKnown RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 IFNAR1P17181 557 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 NLRP5P59047 1200 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 PTPAQ15257 358 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 IQUBQ8NA54 791 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 RIOK1Q9BRS2 568 aaKnown RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 N4BP1O75113 896 aaKnown RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 GNAT2P19087 354 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 LIFRP42702 1097 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 FANCCQ00597 558 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 SGMS1Q86VZ5 419 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 ZNF512BQ96KM6 892 aaPredicted RBP13.68□□□□□ -0.22
TMEM220-201ENST00000341871 CD248Q9HCU0 757 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 CAPN7Q9Y6W3 813 aa13.68□□□□□ -0.22
TMEM220-201ENST00000341871 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 ATP8B1O43520 1251 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 DEXIO95424 95 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 NLRP12P59046 1061 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 PICALMQ13492 652 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 LONRF2Q1L5Z9 754 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 BORCS6Q96GS4 357 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 MAP3K14Q99558 947 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 FAM107BQ9H098 131 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 ZNF804BA4D1E1 1349 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 TOM1O60784 492 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 SLURP2P0DP57 97 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 SFPQP23246 707 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMEM220-201ENST00000341871 TFAP4Q01664 338 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.67□□□□□ -0.22
TMEM220-201ENST00000341871 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
TMEM220-201ENST00000341871 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
TMEM220-201ENST00000341871 CDCA7Q9BWT1 371 aaPredicted RBP13.67□□□□□ -0.22
TMEM220-201ENST00000341871 BIN2Q9UBW5 565 aaPredicted RBP13.67□□□□□ -0.22
TMEM220-201ENST00000341871 G3BP2Q9UN86 482 aaKnown RBP13.67□□□□□ -0.22
TMEM220-201ENST00000341871 C6orf229H3BNL8 230 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 INPP5BP32019 993 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 CCT5P48643 541 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 NWD2Q9ULI1 1742 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 PARD6BQ9BYG5 372 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 DCP1AQ9NPI6 582 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms