RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MYL10Q9BUA6 226 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 CPVLQ9H3G5 476 aa15.52■□□□□ 0.07
TUBD1-202ENST00000340993 RLFQ13129 1914 aa15.51■□□□□ 0.07
TUBD1-202ENST00000340993 HTTP42858 3142 aa15.51■□□□□ 0.07
TUBD1-202ENST00000340993 TOP1P11387 765 aaKnown RBP15.51■□□□□ 0.07
TUBD1-202ENST00000340993 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
TUBD1-202ENST00000340993 CAP1Q01518 475 aa15.51■□□□□ 0.07
TUBD1-202ENST00000340993 PLS1Q14651 629 aa15.51■□□□□ 0.07
TUBD1-202ENST00000340993 TTBK2Q6IQ55 1244 aa15.51■□□□□ 0.07
TUBD1-202ENST00000340993 NEK1Q96PY6 1258 aa15.51■□□□□ 0.07
TUBD1-202ENST00000340993 TXNRD2Q9NNW7 524 aa15.51■□□□□ 0.07
TUBD1-202ENST00000340993 NAP1L2Q9ULW6 460 aaPredicted RBP15.51■□□□□ 0.07
TUBD1-202ENST00000340993 ERICH2A1L162 156 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 TMEM232C9JQI7 657 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 WDR46O15213 610 aaKnown RBP15.5■□□□□ 0.07
TUBD1-202ENST00000340993 RXRAP19793 462 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 SLC16A2P36021 539 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 WTAPQ15007 396 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 WDR78Q5VTH9 848 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 NFXL1Q6ZNB6 911 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 CCDC144CPQ8IYA2 1237 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 PNMA1Q8ND90 353 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 LPAR1Q92633 364 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 MKL1Q969V6 931 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 TCP11L1Q9NUJ3 509 aa15.5■□□□□ 0.07
TUBD1-202ENST00000340993 SPDYE16A6NNV3 312 aaPredicted RBP15.49■□□□□ 0.07
TUBD1-202ENST00000340993 BMP3P12645 472 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 TAL1P17542 331 aaPredicted RBP15.49■□□□□ 0.07
TUBD1-202ENST00000340993 MCM5P33992 734 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 POTEEQ6S8J3 1075 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 NUP133Q8WUM0 1156 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 LARP6Q9BRS8 491 aaKnown RBP15.49■□□□□ 0.07
TUBD1-202ENST00000340993 UPF3BQ9BZI7 483 aaKnown RBP15.49■□□□□ 0.07
TUBD1-202ENST00000340993 MGAMO43451 1857 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 FKTNO75072 461 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 HOXA7P31268 230 aaPredicted RBP15.49■□□□□ 0.07
TUBD1-202ENST00000340993 FGD1P98174 961 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 SART3Q15020 963 aaKnown RBP15.49■□□□□ 0.07
TUBD1-202ENST00000340993 SEC23AQ15436 765 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 GMCL1P1Q8NEA9 526 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 SMCHD1A6NHR9 2005 aa15.49■□□□□ 0.07
TUBD1-202ENST00000340993 ADGRA2Q96PE1 1338 aa15.48■□□□□ 0.07
TUBD1-202ENST00000340993 PDHBP11177 359 aa15.48■□□□□ 0.07
TUBD1-202ENST00000340993 SP3Q02447 781 aa15.48■□□□□ 0.07
TUBD1-202ENST00000340993 COG2Q14746 738 aa15.48■□□□□ 0.07
TUBD1-202ENST00000340993 C17orf99Q6UX52 265 aa15.48■□□□□ 0.07
TUBD1-202ENST00000340993 BTBD7Q9P203 1132 aa15.48■□□□□ 0.07
TUBD1-202ENST00000340993 SLC45A1Q9Y2W3 748 aa15.48■□□□□ 0.07
TUBD1-202ENST00000340993 CTGFP29279 349 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 Q3C1V9 767 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 PPP4R3BQ5MIZ7 849 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 BLOC1S2Q6QNY1 142 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
TUBD1-202ENST00000340993 DGKHQ86XP1 1220 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 CPXCR1Q8N123 301 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 SLF1Q9BQI6 1058 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 UBA5Q9GZZ9 404 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 LY9Q9HBG7 655 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
TUBD1-202ENST00000340993 MYH6P13533 1939 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 SH2B2O14492 632 aaPredicted RBP15.47■□□□□ 0.07
TUBD1-202ENST00000340993 DSG3P32926 999 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 KRT32Q14532 448 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 IGDCC4Q8TDY8 1250 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 RBPJLQ9UBG7 517 aa15.47■□□□□ 0.07
TUBD1-202ENST00000340993 CTDP1Q9Y5B0 961 aaPredicted RBP15.47■□□□□ 0.07
TUBD1-202ENST00000340993 BRCA2P51587 3418 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 CCDC69A6NI79 296 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 DHX16O60231 1041 aaKnown RBP15.46■□□□□ 0.07
TUBD1-202ENST00000340993 CNMDO75829 334 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 FMNL1O95466 1100 aaPredicted RBP15.46■□□□□ 0.07
TUBD1-202ENST00000340993 BCRP11274 1271 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 NOVP48745 357 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 STAT2P52630 851 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 ERVK-9P63128 1117 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 ERVK-24P63145 666 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
TUBD1-202ENST00000340993 CCAR1Q8IX12 1150 aaKnown RBP15.46■□□□□ 0.07
TUBD1-202ENST00000340993 STAG2Q8N3U4 1231 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 TTC14Q96N46 770 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 CWC22Q9HCG8 908 aaKnown RBP15.46■□□□□ 0.07
TUBD1-202ENST00000340993 VAT1LQ9HCJ6 419 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 PPP1R9AQ9ULJ8 1098 aa15.46■□□□□ 0.07
TUBD1-202ENST00000340993 PSMC4P43686 418 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 LACTBP83111 547 aaPredicted RBP15.45■□□□□ 0.06
TUBD1-202ENST00000340993 CCDC178Q5BJE1 867 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 COL13A1Q5TAT6 717 aaPredicted RBP15.45■□□□□ 0.06
TUBD1-202ENST00000340993 Q6ZUG5 572 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 MICU3Q86XE3 530 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 DCAF4Q8WV16 495 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 KCNB2Q92953 911 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 GMCL1Q96IK5 515 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 PORCNQ9H237 461 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 EFCC1Q9HA90 598 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 TRIM17Q9Y577 477 aa15.45■□□□□ 0.06
TUBD1-202ENST00000340993 APOBRQ0VD83 1088 aa15.44■□□□□ 0.06
TUBD1-202ENST00000340993 TSGA10IPQ3SY00 556 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms