RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 NT5C2P49902 561 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PTGDRQ13258 359 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 E4F1Q66K89 784 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PIK3AP1Q6ZUJ8 805 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CCAR2Q8N163 923 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 GPKOWQ92917 476 aaPredicted RBP eCLIP14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 FERMT2Q96AC1 680 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PAGE5Q96GU1 130 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 FHDC1Q9C0D6 1143 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 KAT14Q9H8E8 782 aa14.82□□□□□ -0.04
CDK5RAP1-201ENST00000339269 KIF13BQ9NQT8 1826 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CTIFO43310 598 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 BMP15O95972 392 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 SLFN14P0C7P3 912 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PTPN21Q16825 1174 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 C16orf86Q6ZW13 317 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 VSTM4Q8IW00 320 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 SMARCE1Q969G3 411 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 DHX58Q96C10 678 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 FAM163AQ96GL9 167 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 RBM17Q96I25 401 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 MTRQ99707 1265 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TMEM47Q9BQJ4 181 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 NRXN2Q9P2S2 1712 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 ANKRD31Q8N7Z5 1873 aa14.81□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PALM3A6NDB9 673 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 BAG3O95817 575 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TNNT1P13805 278 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CD44P16070 742 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 KIF5BP33176 963 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TRAPPC10P48553 1259 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 NOVP48745 357 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 NLRP5P59047 1200 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 ST5P78524 1137 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 DPYDQ12882 1025 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 OLFM4Q6UX06 510 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TRMT44Q8IYL2 757 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TRIML1Q8N9V2 468 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 MLKLQ8NB16 471 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CCDC150Q8NCX0 1101 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 ENOX1Q8TC92 643 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CRAMP1Q96RY5 1269 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 BRMS1Q9HCU9 246 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 FLT1P17948 1338 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 MYO1BO43795 1136 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 BBOX1O75936 387 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 LDHCP07864 332 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CDK8P49336 464 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 UBASH3AP57075 661 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TPM4P67936 248 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CUL4BQ13620 913 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 WWC2Q6AWC2 1192 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 APTXQ7Z2E3 356 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 RASGRP4Q8TDF6 673 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 NOL10Q9BSC4 688 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TMX1Q9H3N1 280 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 SH3GLB2Q9NR46 395 aa14.8□□□□□ -0.04
CDK5RAP1-201ENST00000339269 VWA3AA6NCI4 1184 aa14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 STXBP3O00186 592 aa14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TBX2Q13207 712 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 HSP90AA2PQ14568 343 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TPD52L1Q16890 204 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 KANK3Q6NY19 840 aa14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PDXDC2PQ6P474 469 aa14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 SYT17Q9BSW7 474 aa14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 MKNK2Q9HBH9 465 aa14.79□□□□□ -0.04
CDK5RAP1-201ENST00000339269 KCNJ6P48051 423 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 GOLGA8FQ08AF8 430 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 GOLGA8DPQ0D2H9 430 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 MFSD14BQ5SR56 506 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TMEM139Q8IV31 216 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TEX11Q8IYF3 940 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 BLIDQ8IZY5 108 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 DAGLBQ8NCG7 672 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 HOOK1Q9UJC3 728 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PCDHA4Q9UN74 947 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 NFE2L3Q9Y4A8 694 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TSPY3P0CV98 308 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TSPY8P0CW00 308 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 MCM7P33993 719 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 AFMP43652 599 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 HSP90AA4PQ58FG1 418 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 CPVLQ9H3G5 476 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 SAMSN1Q9NSI8 373 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 TRMT1Q9NXH9 659 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 DAGLAQ9Y4D2 1042 aa14.78□□□□□ -0.04
CDK5RAP1-201ENST00000339269 FOCADQ5VW36 1801 aa14.77□□□□□ -0.04
CDK5RAP1-201ENST00000339269 PPP1R3GB7ZBB8 358 aa14.77□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CERS5Q8N5B7 392 aa14.77□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PCDHA6Q9UN73 950 aa14.77□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PCDHA8Q9Y5H6 950 aa14.77□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CBFA2T2O43439 604 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SERPINC1P01008 464 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GOLGA8HP0CJ92 632 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SFPQP23246 707 aaKnown RBP eCLIP14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CALML3P27482 149 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 ERCC5P28715 1186 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CFAP100Q494V2 611 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CCDC178Q5BJE1 867 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms