RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 IFNKQ9P0W0 207 aa13.54□□□□□ -0.24
FN1-202ENST00000336916 LMNB1P20700 586 aa13.54□□□□□ -0.24
FN1-202ENST00000336916 LMNB2Q03252 620 aa13.54□□□□□ -0.24
FN1-202ENST00000336916 CACNA2D3Q8IZS8 1091 aa13.54□□□□□ -0.24
FN1-202ENST00000336916 EXOC3O60645 756 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 OATP04181 439 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 PPP4R1Q8TF05 950 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
FN1-202ENST00000336916 POLR2MP0CAP2 368 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 C8orf74Q6P047 294 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
FN1-202ENST00000336916 PRKAG2Q9UGJ0 569 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 PCDHB15Q9Y5E8 787 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
FN1-202ENST00000336916 TRIM11Q96F44 468 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 RPS6KC1Q96S38 1066 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 SELENOSQ9BQE4 189 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 HAUS8Q9BT25 410 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 MYL1P05976 194 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 PRIM1P49642 420 aaKnown RBP13.53□□□□□ -0.24
FN1-202ENST00000336916 HADHQ16836 314 aaKnown RBP13.53□□□□□ -0.24
FN1-202ENST00000336916 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
FN1-202ENST00000336916 USP26Q9BXU7 913 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 LRWD1Q9UFC0 647 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 STAT1P42224 750 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 HELBQ8NG08 1087 aaPredicted RBP13.53□□□□□ -0.24
FN1-202ENST00000336916 PCDHA12Q9UN75 941 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 DENND2CQ68D51 928 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 AK8Q96MA6 479 aa13.53□□□□□ -0.24
FN1-202ENST00000336916 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.24
FN1-202ENST00000336916 NBPF11Q86T75 865 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 BBS5Q8N3I7 341 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 MLXIPQ9HAP2 919 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 ZNF215Q9UL58 517 aaPredicted RBP13.52□□□□□ -0.24
FN1-202ENST00000336916 TNNI1P19237 187 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.24
FN1-202ENST00000336916 SFMBT2Q5VUG0 894 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 NCAPH2Q6IBW4 605 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 BBOX1O75936 387 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 ZNF202O95125 648 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 IGHDP01880 384 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 TERF1P54274 439 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 ZNF174Q15697 407 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 RINT1Q6NUQ1 792 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 PHLDB2Q86SQ0 1253 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 KCNK9Q9NPC2 374 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 C1orf112Q9NSG2 853 aa13.52□□□□□ -0.24
FN1-202ENST00000336916 NUF2Q9BZD4 464 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 ZNF408Q9H9D4 720 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 PLEKHG3A1L390 1219 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 IL13P35225 146 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 METTL13Q8N6R0 699 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 LARSQ9P2J5 1176 aaKnown RBP13.52□□□□□ -0.25
FN1-202ENST00000336916 ZNF532Q9HCE3 1301 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 ARAP3Q8WWN8 1544 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 CHMP2AO43633 222 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 MNAT1P51948 309 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 SDCCAG8Q86SQ7 713 aaPredicted RBP13.52□□□□□ -0.25
FN1-202ENST00000336916 CACTINQ8WUQ7 758 aaKnown RBP13.52□□□□□ -0.25
FN1-202ENST00000336916 PSTPIP2Q9H939 334 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.25
FN1-202ENST00000336916 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 GBP6Q6ZN66 633 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 MYH7P12883 1935 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 ANKRD12Q6UB98 2062 aa13.52□□□□□ -0.25
FN1-202ENST00000336916 HMGB3O15347 200 aaKnown RBP13.51□□□□□ -0.25
FN1-202ENST00000336916 CIAO1O76071 339 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 HSPA8P11142 646 aaKnown RBP13.51□□□□□ -0.25
FN1-202ENST00000336916 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 CAPN9O14815 690 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 GIMAP8Q8ND71 665 aaPredicted RBP13.51□□□□□ -0.25
FN1-202ENST00000336916 COL4A3BPQ9Y5P4 624 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 GCFC2P16383 781 aaKnown RBP13.51□□□□□ -0.25
FN1-202ENST00000336916 PRPSAP1Q14558 356 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 TRIM50Q86XT4 487 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 RSAD2Q8WXG1 361 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 ATP6V0A1Q93050 837 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 PTPRTO14522 1441 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
FN1-202ENST00000336916 ARMC9Q7Z3E5 817 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 ARMT1Q9H993 441 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 CFBP00751 764 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 TRAPPC10P48553 1259 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 USH1GQ495M9 461 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 EAPPQ56P03 285 aaPredicted RBP13.51□□□□□ -0.25
FN1-202ENST00000336916 IFT81Q8WYA0 676 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 HVCN1Q96D96 273 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
FN1-202ENST00000336916 LIG4P49917 911 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 SATB1Q01826 763 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 KRT81Q14533 505 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 NRBP2Q9NSY0 501 aa13.51□□□□□ -0.25
FN1-202ENST00000336916 SLC12A6Q9UHW9 1150 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms