RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 GTF2IP78347 998 aa19.83■□□□□ 0.76
DDX28-201ENST00000332395 C16orf45Q96MC5 204 aaPredicted RBP19.83■□□□□ 0.76
DDX28-201ENST00000332395 FANCLQ9NW38 375 aa19.83■□□□□ 0.76
DDX28-201ENST00000332395 DACH1Q9UI36 760 aa19.83■□□□□ 0.76
DDX28-201ENST00000332395 MYH1P12882 1939 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 PALM3A6NDB9 673 aaPredicted RBP19.82■□□□□ 0.76
DDX28-201ENST00000332395 RIMBP2O15034 1052 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 SERPINC1P01008 464 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 MCM7P33993 719 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 UBASH3AP57075 661 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 ZNF827Q17R98 1081 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 TYW1BQ6NUM6 668 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 DAGLAQ9Y4D2 1042 aa19.82■□□□□ 0.76
DDX28-201ENST00000332395 GTF2F1P35269 517 aaKnown RBP eCLIP19.81■□□□□ 0.76
DDX28-201ENST00000332395 CCDC150Q8NCX0 1101 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 NEDD1Q8NHV4 660 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 COA1Q9GZY4 146 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 FOCADQ5VW36 1801 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 CBFA2T2O43439 604 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 WWC2Q6AWC2 1192 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 SH3RF1Q7Z6J0 888 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 DPF2Q92785 391 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 LZTS2Q9BRK4 669 aa19.81■□□□□ 0.76
DDX28-201ENST00000332395 SRGNP10124 158 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 AFMP43652 599 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 FMR1Q06787 632 aaKnown RBP eCLIP19.8■□□□□ 0.76
DDX28-201ENST00000332395 TPD52L1Q16890 204 aaPredicted RBP19.8■□□□□ 0.76
DDX28-201ENST00000332395 ARMCX5Q6P1M9 558 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 NLGN1Q8N2Q7 840 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 CCDC148Q8NFR7 591 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 PAGE5Q96GU1 130 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 NRXN2Q9P2S2 1712 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 M0R2N6 131 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 CFAP100Q494V2 611 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 HEATR3Q7Z4Q2 680 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 RASGRP4Q8TDF6 673 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 ARID3AQ99856 593 aa19.8■□□□□ 0.76
DDX28-201ENST00000332395 GOLGA8HP0CJ92 632 aa19.79■□□□□ 0.76
DDX28-201ENST00000332395 DHX8Q14562 1220 aaKnown RBP19.79■□□□□ 0.76
DDX28-201ENST00000332395 RASGRP2Q7LDG7 609 aa19.79■□□□□ 0.76
DDX28-201ENST00000332395 ENOX1Q8TC92 643 aaKnown RBP19.79■□□□□ 0.76
DDX28-201ENST00000332395 BARHL2Q9NY43 387 aa19.79■□□□□ 0.76
DDX28-201ENST00000332395 KLRF2D3W0D1 207 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 STXBP3O00186 592 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 NPR1P16066 1061 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 SFPQP23246 707 aaKnown RBP eCLIP19.78■□□□□ 0.76
DDX28-201ENST00000332395 IL17AQ16552 155 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 GALNT17Q6IS24 598 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 COL23A1Q86Y22 540 aaPredicted RBP19.78■□□□□ 0.76
DDX28-201ENST00000332395 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 CEP95Q96GE4 821 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 SUGT1Q9Y2Z0 365 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 NFE2L3Q9Y4A8 694 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 CCDC194A0A1B0GVG4 234 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 USP27XA6NNY8 438 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 TNNT1P13805 278 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 ARL6IP4Q66PJ3 421 aaKnown RBP19.78■□□□□ 0.76
DDX28-201ENST00000332395 SPZ1Q9BXG8 430 aa19.78■□□□□ 0.76
DDX28-201ENST00000332395 ZC3H12CQ9C0D7 883 aaKnown RBP19.78■□□□□ 0.76
DDX28-201ENST00000332395 PARP1P09874 1014 aaKnown RBP19.77■□□□□ 0.76
DDX28-201ENST00000332395 TOP1P11387 765 aaKnown RBP19.77■□□□□ 0.76
DDX28-201ENST00000332395 DPYDQ12882 1025 aa19.77■□□□□ 0.76
DDX28-201ENST00000332395 TRMT44Q8IYL2 757 aaKnown RBP19.77■□□□□ 0.76
DDX28-201ENST00000332395 CERS5Q8N5B7 392 aa19.77■□□□□ 0.76
DDX28-201ENST00000332395 C4orf32Q8N8J7 132 aa19.77■□□□□ 0.76
DDX28-201ENST00000332395 AKT1S1Q96B36 256 aa19.77■□□□□ 0.76
DDX28-201ENST00000332395 PCDHA6Q9UN73 950 aa19.77■□□□□ 0.76
DDX28-201ENST00000332395 PCDHA8Q9Y5H6 950 aa19.77■□□□□ 0.76
DDX28-201ENST00000332395 F8W031 263 aaPredicted RBP19.77■□□□□ 0.75
DDX28-201ENST00000332395 ZNF18P17022 549 aa19.77■□□□□ 0.75
DDX28-201ENST00000332395 CASP1P29466 404 aa19.77■□□□□ 0.75
DDX28-201ENST00000332395 E2F4Q16254 413 aa19.77■□□□□ 0.75
DDX28-201ENST00000332395 ZNF710Q8N1W2 664 aa19.77■□□□□ 0.75
DDX28-201ENST00000332395 IQUBQ8NA54 791 aa19.77■□□□□ 0.75
DDX28-201ENST00000332395 CPVLQ9H3G5 476 aa19.77■□□□□ 0.75
DDX28-201ENST00000332395 QSER1Q2KHR3 1735 aa19.77■□□□□ 0.75
DDX28-201ENST00000332395 ERCC5P28715 1186 aaPredicted RBP19.76■□□□□ 0.75
DDX28-201ENST00000332395 NOVP48745 357 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 PICALMQ13492 652 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 HSP90AA4PQ58FG1 418 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 VSTM4Q8IW00 320 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 FAM177A1Q8N128 213 aaPredicted RBP19.76■□□□□ 0.75
DDX28-201ENST00000332395 GSDMAQ96QA5 445 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 MED15Q96RN5 788 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 PYM1Q9BRP8 204 aaKnown RBP19.76■□□□□ 0.75
DDX28-201ENST00000332395 KCND1Q9NSA2 647 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 RIOK3O14730 519 aaKnown RBP19.76■□□□□ 0.75
DDX28-201ENST00000332395 ALDH1B1P30837 517 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 USP17L2Q6R6M4 530 aa19.76■□□□□ 0.75
DDX28-201ENST00000332395 DPP8Q6V1X1 898 aaPredicted RBP19.76■□□□□ 0.75
DDX28-201ENST00000332395 TMEM232C9JQI7 657 aa19.75■□□□□ 0.75
DDX28-201ENST00000332395 PLSCR1O15162 318 aa19.75■□□□□ 0.75
DDX28-201ENST00000332395 LONP1P36776 959 aaKnown RBP19.75■□□□□ 0.75
DDX28-201ENST00000332395 CT47A1Q5JQC4 288 aaPredicted RBP19.75■□□□□ 0.75
DDX28-201ENST00000332395 CCAR2Q8N163 923 aaKnown RBP19.75■□□□□ 0.75
DDX28-201ENST00000332395 INTS13Q9NVM9 706 aa19.75■□□□□ 0.75
DDX28-201ENST00000332395 TTF2Q9UNY4 1162 aaKnown RBP19.75■□□□□ 0.75
DDX28-201ENST00000332395 COL11A2P13942 1736 aaPredicted RBP19.75■□□□□ 0.75
DDX28-201ENST00000332395 PDE6BP35913 854 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 UTP14CQ5TAP6 766 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms