RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 CEP57L1Q8IYX8 460 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 MTMR4Q9NYA4 1195 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 SCN9AQ15858 1988 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 A0A087X0B3 334 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 IGKV6D-41A0A0C4DH26 115 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 M0R2N6 131 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 BLIDQ8IZY5 108 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 PDILTQ8N807 584 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 EPSTI1Q96J88 318 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 ZDHHC15Q96MV8 337 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 SH3GLB2Q9NR46 395 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 SERTAD1Q9UHV2 236 aa18.16■□□□□ 0.5
PGBD2-201ENST00000329291 STXBP3O00186 592 aa18.15■□□□□ 0.5
PGBD2-201ENST00000329291 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
PGBD2-201ENST00000329291 ZNF500O60304 480 aaPredicted RBP18.15■□□□□ 0.5
PGBD2-201ENST00000329291 PARP1P09874 1014 aaKnown RBP18.15■□□□□ 0.5
PGBD2-201ENST00000329291 PTGDRQ13258 359 aa18.15■□□□□ 0.5
PGBD2-201ENST00000329291 HEATR3Q7Z4Q2 680 aa18.15■□□□□ 0.5
PGBD2-201ENST00000329291 MRIQ9BWK5 157 aa18.15■□□□□ 0.5
PGBD2-201ENST00000329291 NRBP1Q9UHY1 535 aa18.15■□□□□ 0.5
PGBD2-201ENST00000329291 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
PGBD2-201ENST00000329291 GOLGA6L19H0YKK7 550 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 IL17AQ16552 155 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 GRAMD1CQ8IYS0 662 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 UBA5Q9GZZ9 404 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 KCNF1Q9H3M0 494 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 VAT1LQ9HCJ6 419 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 FAM13BQ9NYF5 915 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 PCDHA4Q9UN74 947 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 PCDHA5Q9Y5H7 936 aa18.14■□□□□ 0.5
PGBD2-201ENST00000329291 MORC2Q9Y6X9 1032 aaPredicted RBP18.14■□□□□ 0.5
PGBD2-201ENST00000329291 YDJCA8MPS7 323 aa18.14■□□□□ 0.49
PGBD2-201ENST00000329291 BECN2A8MW95 431 aa18.14■□□□□ 0.49
PGBD2-201ENST00000329291 PRR29P0C7W0 189 aa18.14■□□□□ 0.49
PGBD2-201ENST00000329291 DPEP1P16444 411 aa18.14■□□□□ 0.49
PGBD2-201ENST00000329291 HDLBPQ00341 1268 aaKnown RBP18.14■□□□□ 0.49
PGBD2-201ENST00000329291 TCP10Q12799 353 aa18.14■□□□□ 0.49
PGBD2-201ENST00000329291 LRRC47Q8N1G4 583 aaKnown RBP18.14■□□□□ 0.49
PGBD2-201ENST00000329291 BARHL2Q9NY43 387 aa18.14■□□□□ 0.49
PGBD2-201ENST00000329291 FAM198AQ9UFP1 575 aa18.14■□□□□ 0.49
PGBD2-201ENST00000329291 BMP6P22004 513 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 SHROOM1Q2M3G4 852 aaPredicted RBP18.13■□□□□ 0.49
PGBD2-201ENST00000329291 SH3BP5LQ7L8J4 393 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 SPZ1Q9BXG8 430 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 DNAJC18Q9H819 358 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 CLIP2Q9UDT6 1046 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 PCDHA6Q9UN73 950 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 PCDHA8Q9Y5H6 950 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 PLIN4Q96Q06 1357 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 DDTLA6NHG4 134 aaPredicted RBP18.13■□□□□ 0.49
PGBD2-201ENST00000329291 FAM196BA6NMK8 535 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 ACTN4O43707 911 aaKnown RBP18.13■□□□□ 0.49
PGBD2-201ENST00000329291 CALML3P27482 149 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 MCM7P33993 719 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 RBM5P52756 815 aaKnown RBP eCLIP18.13■□□□□ 0.49
PGBD2-201ENST00000329291 ATP2C1P98194 919 aaPredicted RBP18.13■□□□□ 0.49
PGBD2-201ENST00000329291 SARM1Q6SZW1 724 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 LZTS2Q9BRK4 669 aa18.13■□□□□ 0.49
PGBD2-201ENST00000329291 NAT10Q9H0A0 1025 aaKnown RBP18.13■□□□□ 0.49
PGBD2-201ENST00000329291 FRMPD2Q68DX3 1309 aaPredicted RBP18.12■□□□□ 0.49
PGBD2-201ENST00000329291 PDHBP11177 359 aa18.12■□□□□ 0.49
PGBD2-201ENST00000329291 NCAPHQ15003 741 aa18.12■□□□□ 0.49
PGBD2-201ENST00000329291 ZRSR1Q15695 479 aaKnown RBP18.12■□□□□ 0.49
PGBD2-201ENST00000329291 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
PGBD2-201ENST00000329291 C4orf32Q8N8J7 132 aa18.12■□□□□ 0.49
PGBD2-201ENST00000329291 SYMPKQ92797 1274 aaKnown RBP18.12■□□□□ 0.49
PGBD2-201ENST00000329291 PIGSQ96S52 555 aa18.12■□□□□ 0.49
PGBD2-201ENST00000329291 PSMD1Q99460 953 aa18.12■□□□□ 0.49
PGBD2-201ENST00000329291 BPIFA3Q9BQP9 254 aa18.12■□□□□ 0.49
PGBD2-201ENST00000329291 KCNA3P22001 575 aa18.11■□□□□ 0.49
PGBD2-201ENST00000329291 VWA3AA6NCI4 1184 aa18.11■□□□□ 0.49
PGBD2-201ENST00000329291 ZBTB7AO95365 584 aa18.11■□□□□ 0.49
PGBD2-201ENST00000329291 PTGS1P23219 599 aa18.11■□□□□ 0.49
PGBD2-201ENST00000329291 POLD1P28340 1107 aa18.11■□□□□ 0.49
PGBD2-201ENST00000329291 ELOA2Q8IYF1 753 aaPredicted RBP18.11■□□□□ 0.49
PGBD2-201ENST00000329291 C17orf53Q8N3J3 647 aaPredicted RBP18.11■□□□□ 0.49
PGBD2-201ENST00000329291 FERMT2Q96AC1 680 aa18.11■□□□□ 0.49
PGBD2-201ENST00000329291 SWAP70Q9UH65 585 aa18.11■□□□□ 0.49
PGBD2-201ENST00000329291 HLA-DOAP06340 250 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 TRAPPC10P48553 1259 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 POSTNQ15063 836 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 SOGA3Q5TF21 947 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 CCDC186Q7Z3E2 898 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 TGFB2P61812 414 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 CCDC144BQ3MJ40 725 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 DRC7Q8IY82 874 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 DAGLBQ8NCG7 672 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 DHX58Q96C10 678 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 HSD3B7Q9H2F3 369 aa18.1■□□□□ 0.49
PGBD2-201ENST00000329291 ZNF646O15015 1829 aaPredicted RBP18.09■□□□□ 0.49
PGBD2-201ENST00000329291 MPHOSPH10O00566 681 aaKnown RBP18.09■□□□□ 0.49
PGBD2-201ENST00000329291 BMP15O95972 392 aa18.09■□□□□ 0.49
PGBD2-201ENST00000329291 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
PGBD2-201ENST00000329291 SARSP49591 514 aaKnown RBP18.09■□□□□ 0.49
PGBD2-201ENST00000329291 RRP36Q96EU6 259 aaKnown RBP18.09■□□□□ 0.49
PGBD2-201ENST00000329291 RIOX1Q9H6W3 641 aa18.09■□□□□ 0.49
PGBD2-201ENST00000329291 GPCPD1Q9NPB8 672 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms