RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 EGR3Q06889 387 aa6.04□□□□□ -1.44
SKP1-201ENST00000328392 SNW1Q13573 536 aaKnown RBP6.04□□□□□ -1.44
SKP1-201ENST00000328392 TTC6Q86TZ1 520 aa6.04□□□□□ -1.44
SKP1-201ENST00000328392 TMEM40Q8WWA1 233 aa6.04□□□□□ -1.44
SKP1-201ENST00000328392 ZNF512BQ96KM6 892 aaPredicted RBP6.04□□□□□ -1.44
SKP1-201ENST00000328392 TRIT1Q9H3H1 467 aaKnown RBP6.04□□□□□ -1.44
SKP1-201ENST00000328392 GOLGA2P5Q9HBQ8 144 aa6.04□□□□□ -1.44
SKP1-201ENST00000328392 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.04□□□□□ -1.44
SKP1-201ENST00000328392 DUSP13Q9UII6 198 aa6.04□□□□□ -1.44
SKP1-201ENST00000328392 PCDHA11Q9Y5I1 949 aa6.04□□□□□ -1.44
SKP1-201ENST00000328392 ZNF503-AS2A6NEH8 195 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.03□□□□□ -1.44
SKP1-201ENST00000328392 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
SKP1-201ENST00000328392 NME1P15531 152 aaKnown RBP6.03□□□□□ -1.44
SKP1-201ENST00000328392 GDNFP39905 211 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 HK2P52789 917 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 COL9A2Q14055 689 aaPredicted RBP6.03□□□□□ -1.44
SKP1-201ENST00000328392 NBPF12Q5TAG4 269 aaPredicted RBP6.03□□□□□ -1.44
SKP1-201ENST00000328392 ANKS3Q6ZW76 656 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 ZSWIM9Q86XI8 627 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 TMEM192Q8IY95 271 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 FAM169BQ8N8A8 192 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 HNRNPLLQ8WVV9 542 aaKnown RBP6.03□□□□□ -1.44
SKP1-201ENST00000328392 SLC9A7Q96T83 725 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 ZNRF3Q9ULT6 936 aa6.03□□□□□ -1.44
SKP1-201ENST00000328392 CCDC85CA6NKD9 419 aa6.02□□□□□ -1.45
SKP1-201ENST00000328392 AFMP43652 599 aa6.02□□□□□ -1.45
SKP1-201ENST00000328392 CHMP4BP1P59074 171 aa6.02□□□□□ -1.45
SKP1-201ENST00000328392 KCNMB1Q16558 191 aa6.02□□□□□ -1.45
SKP1-201ENST00000328392 TMC3Q7Z5M5 1100 aa6.02□□□□□ -1.45
SKP1-201ENST00000328392 LSRQ86X29 649 aaPredicted RBP6.02□□□□□ -1.45
SKP1-201ENST00000328392 LIN37Q96GY3 246 aaPredicted RBP6.02□□□□□ -1.45
SKP1-201ENST00000328392 SHDQ96IW2 340 aa6.02□□□□□ -1.45
SKP1-201ENST00000328392 KIRREL1Q96J84 757 aa6.02□□□□□ -1.45
SKP1-201ENST00000328392 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.02□□□□□ -1.45
SKP1-201ENST00000328392 R3HCC1Q9Y3T6 440 aaKnown RBP6.02□□□□□ -1.45
SKP1-201ENST00000328392 MEIS3P2A8K0S8 358 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 ACRP10323 421 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 LTKP29376 864 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 TRHRP34981 398 aaPredicted RBP6.01□□□□□ -1.45
SKP1-201ENST00000328392 NMIQ13287 307 aaPredicted RBP6.01□□□□□ -1.45
SKP1-201ENST00000328392 CLEC16AQ2KHT3 1053 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 LRRFIP1Q32MZ4 808 aaKnown RBP6.01□□□□□ -1.45
SKP1-201ENST00000328392 NBPF9Q3BBW0 867 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 ZNF648Q5T619 568 aaPredicted RBP6.01□□□□□ -1.45
SKP1-201ENST00000328392 LARP1BQ659C4 914 aaKnown RBP6.01□□□□□ -1.45
SKP1-201ENST00000328392 CKAP2LQ8IYA6 745 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 ST7Q9NRC1 585 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 FAM86C1Q9NVL1 165 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 EBF1Q9UH73 591 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 TMEM59LQ9UK28 342 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 MINPP1Q9UNW1 487 aa6.01□□□□□ -1.45
SKP1-201ENST00000328392 TNFRSF10CO14798 259 aa6□□□□□ -1.45
SKP1-201ENST00000328392 CLEC3AO75596 197 aa6□□□□□ -1.45
SKP1-201ENST00000328392 GIPRP48546 466 aa6□□□□□ -1.45
SKP1-201ENST00000328392 DPH6Q7L8W6 267 aa6□□□□□ -1.45
SKP1-201ENST00000328392 POU5F2Q8N7G0 328 aa6□□□□□ -1.45
SKP1-201ENST00000328392 SLC6A18Q96N87 628 aa6□□□□□ -1.45
SKP1-201ENST00000328392 TRIM55Q9BYV6 548 aa6□□□□□ -1.45
SKP1-201ENST00000328392 LNPKQ9C0E8 428 aa6□□□□□ -1.45
SKP1-201ENST00000328392 PRDM14Q9GZV8 571 aa6□□□□□ -1.45
SKP1-201ENST00000328392 STRIP2Q9ULQ0 834 aa6□□□□□ -1.45
SKP1-201ENST00000328392 LOC105371045A0A1W2PR82 267 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 ZGLP1P0C6A0 271 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 IMPDH2P12268 514 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 RNF4P78317 190 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 TEKQ02763 1124 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 BMS1Q14692 1282 aaKnown RBP5.99□□□□□ -1.45
SKP1-201ENST00000328392 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 KRTAP1-3Q8IUG1 177 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 USHBP1Q8N6Y0 703 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 HIRIP3Q9BW71 556 aaPredicted RBP5.99□□□□□ -1.45
SKP1-201ENST00000328392 HDAC8Q9BY41 377 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 C19orf44Q9H6X5 657 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 SP110Q9HB58 689 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 PRKAG3Q9UGI9 489 aa5.99□□□□□ -1.45
SKP1-201ENST00000328392 LRRC10BA6NIK2 292 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 C8AP07357 584 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 GLI1P08151 1106 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 CCNFP41002 786 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 ZYXQ15942 572 aaKnown RBP5.98□□□□□ -1.45
SKP1-201ENST00000328392 MLANAQ16655 118 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 CCDC144BQ3MJ40 725 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 TIGD5Q53EQ6 642 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 TMEM67Q5HYA8 995 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 PRR23BQ6ZRT6 265 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 SYTL5Q8TDW5 730 aaPredicted RBP5.98□□□□□ -1.45
SKP1-201ENST00000328392 TCTN2Q96GX1 697 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 FOXP3Q9BZS1 431 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 ASCC2Q9H1I8 757 aaPredicted RBP5.98□□□□□ -1.45
SKP1-201ENST00000328392 ZSWIM4Q9H7M6 989 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 KCNK12Q9HB15 430 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 PCDHB10Q9UN67 800 aa5.98□□□□□ -1.45
SKP1-201ENST00000328392 C9IYK1 514 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 U2SURPO15042 1029 aaKnown RBP5.97□□□□□ -1.45
SKP1-201ENST00000328392 PRAMEF1O95521 474 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 HPXP02790 462 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 ZPBP2Q6X784 338 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 CELF2-AS1Q8N7Q2 184 aa5.97□□□□□ -1.45
SKP1-201ENST00000328392 DAGLBQ8NCG7 672 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms