RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
IFT88-201ENST00000319980 MAST2Q6P0Q8 1798 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 KIAA1551Q9HCM1 1747 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 VWA3AA6NCI4 1184 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 PALM3A6NDB9 673 aaPredicted RBP8.65□□□□□ -1.03
IFT88-201ENST00000319980 CALML3P27482 149 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 NCAPHQ15003 741 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 USP17L2Q6R6M4 530 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 BLIDQ8IZY5 108 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 DHX58Q96C10 678 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 DDX4Q9NQI0 724 aaKnown RBP8.65□□□□□ -1.03
IFT88-201ENST00000319980 SUGT1Q9Y2Z0 365 aa8.65□□□□□ -1.03
IFT88-201ENST00000319980 ECM29Q5VYK3 1845 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 SMTNL1A8MU46 457 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 BMP15O95972 392 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 PRR29P0C7W0 189 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 CDC25BP30305 580 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 TPM4P67936 248 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 HOMER1Q86YM7 354 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 C2CD5Q86YS7 1000 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
IFT88-201ENST00000319980 FERMT2Q96AC1 680 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 SGIP1Q9BQI5 828 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 USP40Q9NVE5 1235 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 H0YIN7 160 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 SMC2O95347 1197 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 PARP1P09874 1014 aaKnown RBP8.64□□□□□ -1.03
IFT88-201ENST00000319980 BMP6P22004 513 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 EIF6P56537 245 aaKnown RBP8.64□□□□□ -1.03
IFT88-201ENST00000319980 WWC2Q6AWC2 1192 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 CACTINQ8WUQ7 758 aaKnown RBP8.64□□□□□ -1.03
IFT88-201ENST00000319980 VAT1LQ9HCJ6 419 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 PCDHA4Q9UN74 947 aa8.64□□□□□ -1.03
IFT88-201ENST00000319980 A0A087X0B3 334 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 ACTN4O43707 911 aaKnown RBP8.63□□□□□ -1.03
IFT88-201ENST00000319980 TOP1P11387 765 aaKnown RBP8.63□□□□□ -1.03
IFT88-201ENST00000319980 ATP1A3P13637 1013 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 AFMP43652 599 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 TRAPPC10P48553 1259 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 ATP2C1P98194 919 aaPredicted RBP8.63□□□□□ -1.03
IFT88-201ENST00000319980 ARID5BQ14865 1188 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 ELOA2Q8IYF1 753 aaPredicted RBP8.63□□□□□ -1.03
IFT88-201ENST00000319980 SMARCE1Q969G3 411 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 SH3GLB2Q9NR46 395 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 IFNKQ9P0W0 207 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 SNED1Q8TER0 1413 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 IKBKBO14920 756 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 CHRNA5P30532 468 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 MYL5Q02045 173 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 KANK3Q6NY19 840 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 PODNQ7Z5L7 613 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 TEKT1Q969V4 418 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 XPO4Q9C0E2 1151 aaKnown RBP8.63□□□□□ -1.03
IFT88-201ENST00000319980 BARHL2Q9NY43 387 aa8.63□□□□□ -1.03
IFT88-201ENST00000319980 CCDC194A0A1B0GVG4 234 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 GABPAQ06546 454 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 APOBEC3HQ6NTF7 200 aaKnown RBP8.62□□□□□ -1.03
IFT88-201ENST00000319980 CDC42EP5Q6NZY7 148 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 CLEC10AQ8IUN9 316 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 LRRC8AQ8IWT6 810 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 CCDC148Q8NFR7 591 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 SPOCK2Q92563 424 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 LZTS2Q9BRK4 669 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 UBA5Q9GZZ9 404 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 SPTLC3Q9NUV7 552 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 SERPINB13Q9UIV8 391 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 MAN1B1Q9UKM7 699 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 LAMB1P07942 1786 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 USP17L5A8MUK1 530 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 STXBP3O00186 592 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 AKR1B1P15121 316 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 NFIAQ12857 509 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 R3HDM1Q15032 1099 aaKnown RBP8.62□□□□□ -1.03
IFT88-201ENST00000319980 SLC16A10Q8TF71 515 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 CCDC34Q96HJ3 373 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 HSD3B7Q9H2F3 369 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 MTMR4Q9NYA4 1195 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 MORC2Q9Y6X9 1032 aaPredicted RBP8.62□□□□□ -1.03
IFT88-201ENST00000319980 SLFN14P0C7P3 912 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 CASP1P29466 404 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 CDC25AP30304 524 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
IFT88-201ENST00000319980 RBM5P52756 815 aaKnown RBP eCLIP8.62□□□□□ -1.03
IFT88-201ENST00000319980 CACNB3P54284 484 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 NAPAP54920 295 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 IL17AQ16552 155 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 HSP90AA4PQ58FG1 418 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 NT5DC1Q5TFE4 455 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 HHIPL2Q6UWX4 724 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 LRRC47Q8N1G4 583 aaKnown RBP8.62□□□□□ -1.03
IFT88-201ENST00000319980 STAMQ92783 540 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 SPZ1Q9BXG8 430 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
IFT88-201ENST00000319980 FANCLQ9NW38 375 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 PCDHA6Q9UN73 950 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 PCDHA8Q9Y5H6 950 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 PCDHAC2Q9Y5I4 1007 aa8.62□□□□□ -1.03
IFT88-201ENST00000319980 FRMPD2Q68DX3 1309 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms