RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 EEF2P13639 858 aaKnown RBP28.78■■■□□ 2.2
CDPF1-201ENST00000314567 KIF23Q02241 960 aaPredicted RBP28.78■■■□□ 2.2
CDPF1-201ENST00000314567 FMR1Q06787 632 aaKnown RBP eCLIP28.78■■■□□ 2.2
CDPF1-201ENST00000314567 RNF26Q9BY78 433 aaPredicted RBP28.78■■■□□ 2.2
CDPF1-201ENST00000314567 CABP5Q9NP86 173 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 TAOK2Q9UL54 1235 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 GOLGA6L4A6NEF3 574 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 LETM1O95202 739 aaPredicted RBP28.78■■■□□ 2.2
CDPF1-201ENST00000314567 ICA1Q05084 483 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 KRT40Q6A162 431 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 OTUD7BQ6GQQ9 843 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 LRSAM1Q6UWE0 723 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 RCOR1Q9UKL0 485 aa28.78■■■□□ 2.2
CDPF1-201ENST00000314567 TOP1P11387 765 aaKnown RBP28.77■■■□□ 2.2
CDPF1-201ENST00000314567 CCDC82Q8N4S0 544 aa28.77■■■□□ 2.2
CDPF1-201ENST00000314567 ZKSCAN4Q969J2 545 aaPredicted RBP28.77■■■□□ 2.2
CDPF1-201ENST00000314567 DCAF15Q66K64 600 aa28.76■■■□□ 2.2
CDPF1-201ENST00000314567 CDCA5Q96FF9 252 aa28.76■■■□□ 2.2
CDPF1-201ENST00000314567 KANSL2Q9H9L4 492 aa28.76■■■□□ 2.2
CDPF1-201ENST00000314567 AIFM3Q96NN9 605 aa28.76■■■□□ 2.19
CDPF1-201ENST00000314567 USP28Q96RU2 1077 aa28.76■■■□□ 2.19
CDPF1-201ENST00000314567 WRNIP1Q96S55 665 aa28.76■■■□□ 2.19
CDPF1-201ENST00000314567 ZNF341Q9BYN7 854 aa28.76■■■□□ 2.19
CDPF1-201ENST00000314567 SYCE3A1L190 88 aa28.75■■■□□ 2.19
CDPF1-201ENST00000314567 TRAF5O00463 557 aa28.75■■■□□ 2.19
CDPF1-201ENST00000314567 SUPT20HL1Q3ZLR7 823 aa28.75■■■□□ 2.19
CDPF1-201ENST00000314567 MAP3K14Q99558 947 aa28.75■■■□□ 2.19
CDPF1-201ENST00000314567 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.75■■■□□ 2.19
CDPF1-201ENST00000314567 BAZ2BQ9UIF8 2168 aaKnown RBP28.74■■■□□ 2.19
CDPF1-201ENST00000314567 A0A1W2PRG0 241 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 UBE2Q2LH0YL09 131 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 PLEKHA8P1O95397 391 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 ECE1P42892 770 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 STAG2Q8N3U4 1231 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 CTCFLQ8NI51 663 aaPredicted RBP28.74■■■□□ 2.19
CDPF1-201ENST00000314567 ACER1Q8TDN7 264 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 GOLGA8HP0CJ92 632 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 MYSM1Q5VVJ2 828 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 GJB4Q9NTQ9 266 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 RTEL1Q9NZ71 1219 aa28.74■■■□□ 2.19
CDPF1-201ENST00000314567 USP17L5A8MUK1 530 aa28.73■■■□□ 2.19
CDPF1-201ENST00000314567 RAD21O60216 631 aa28.73■■■□□ 2.19
CDPF1-201ENST00000314567 USP2O75604 605 aaPredicted RBP28.73■■■□□ 2.19
CDPF1-201ENST00000314567 XRCC6P12956 609 aaKnown RBP eCLIP28.73■■■□□ 2.19
CDPF1-201ENST00000314567 AKAP17AQ02040 695 aaKnown RBP28.73■■■□□ 2.19
CDPF1-201ENST00000314567 MOB2Q70IA6 237 aa28.73■■■□□ 2.19
CDPF1-201ENST00000314567 USP17L2Q6R6M4 530 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 TMTC3Q6ZXV5 915 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 KLRG1Q96E93 195 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 POLR3EQ9NVU0 708 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 NYAP2Q9P242 653 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 ZNF112Q9UJU3 913 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 KIF28PB7ZC32 967 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 PRPF3O43395 683 aaKnown RBP28.72■■■□□ 2.19
CDPF1-201ENST00000314567 FUT2Q10981 343 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 HOOK2Q96ED9 719 aa28.72■■■□□ 2.19
CDPF1-201ENST00000314567 DOCK1Q14185 1865 aa28.71■■■□□ 2.19
CDPF1-201ENST00000314567 YEATS4O95619 227 aa28.71■■■□□ 2.19
CDPF1-201ENST00000314567 U2AF2P26368 475 aaKnown RBP eCLIP28.71■■■□□ 2.19
CDPF1-201ENST00000314567 KIF5BP33176 963 aa28.71■■■□□ 2.19
CDPF1-201ENST00000314567 SAFBQ15424 915 aaKnown RBP eCLIP28.71■■■□□ 2.19
CDPF1-201ENST00000314567 PGBD1Q96JS3 809 aa28.71■■■□□ 2.19
CDPF1-201ENST00000314567 CPVLQ9H3G5 476 aa28.71■■■□□ 2.19
CDPF1-201ENST00000314567 MAD2L2Q9UI95 211 aa28.71■■■□□ 2.19
CDPF1-201ENST00000314567 FRMPD2Q68DX3 1309 aaPredicted RBP28.71■■■□□ 2.19
CDPF1-201ENST00000314567 CTNND1O60716 968 aaKnown RBP28.7■■■□□ 2.19
CDPF1-201ENST00000314567 GNL2Q13823 731 aaKnown RBP28.7■■■□□ 2.19
CDPF1-201ENST00000314567 GRM4Q14833 912 aa28.7■■■□□ 2.19
CDPF1-201ENST00000314567 MMP1P03956 469 aa28.7■■■□□ 2.18
CDPF1-201ENST00000314567 ASNSP08243 561 aa28.7■■■□□ 2.18
CDPF1-201ENST00000314567 XBP1P17861 261 aa28.7■■■□□ 2.18
CDPF1-201ENST00000314567 hCG_1642624A0A1W2PR95 340 aa28.69■■■□□ 2.18
CDPF1-201ENST00000314567 PDHBP11177 359 aa28.69■■■□□ 2.18
CDPF1-201ENST00000314567 NASPP49321 788 aaPredicted RBP28.69■■■□□ 2.18
CDPF1-201ENST00000314567 CEBPZQ03701 1054 aaKnown RBP28.69■■■□□ 2.18
CDPF1-201ENST00000314567 ZYXQ15942 572 aaKnown RBP28.69■■■□□ 2.18
CDPF1-201ENST00000314567 SRBD1Q8N5C6 995 aaKnown RBP28.69■■■□□ 2.18
CDPF1-201ENST00000314567 BICD2Q8TD16 824 aa28.69■■■□□ 2.18
CDPF1-201ENST00000314567 MKL1Q969V6 931 aa28.69■■■□□ 2.18
CDPF1-201ENST00000314567 OTOFQ9HC10 1997 aa28.69■■■□□ 2.18
CDPF1-201ENST00000314567 KIAA1755Q5JYT7 1200 aa28.68■■■□□ 2.18
CDPF1-201ENST00000314567 KCNG4Q8TDN1 519 aa28.68■■■□□ 2.18
CDPF1-201ENST00000314567 ZNF408Q9H9D4 720 aa28.68■■■□□ 2.18
CDPF1-201ENST00000314567 DDX19AQ9NUU7 478 aaKnown RBP28.68■■■□□ 2.18
CDPF1-201ENST00000314567 CNTNAP5Q8WYK1 1306 aa28.68■■■□□ 2.18
CDPF1-201ENST00000314567 SLC35G1Q2M3R5 365 aa28.68■■■□□ 2.18
CDPF1-201ENST00000314567 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.68■■■□□ 2.18
CDPF1-201ENST00000314567 PIBF1Q8WXW3 757 aa28.68■■■□□ 2.18
CDPF1-201ENST00000314567 FTOQ9C0B1 505 aaKnown RBP eCLIP28.68■■■□□ 2.18
CDPF1-201ENST00000314567 DGKZQ13574 1117 aa28.67■■■□□ 2.18
CDPF1-201ENST00000314567 TPRNQ4KMQ1 711 aa28.67■■■□□ 2.18
CDPF1-201ENST00000314567 LDHDQ86WU2 507 aa28.67■■■□□ 2.18
CDPF1-201ENST00000314567 SCYL3Q8IZE3 742 aa28.67■■■□□ 2.18
CDPF1-201ENST00000314567 SPICE1Q8N0Z3 855 aa28.67■■■□□ 2.18
CDPF1-201ENST00000314567 NUP88Q99567 741 aaPredicted RBP28.67■■■□□ 2.18
CDPF1-201ENST00000314567 LIG1P18858 919 aa28.66■■■□□ 2.18
CDPF1-201ENST00000314567 LINC00301Q8NCQ3 95 aa28.66■■■□□ 2.18
CDPF1-201ENST00000314567 FOXP1Q9H334 677 aaPredicted RBP28.66■■■□□ 2.18
CDPF1-201ENST00000314567 GNAQP50148 359 aa28.66■■■□□ 2.18
CDPF1-201ENST00000314567 TTLL12Q14166 644 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms