RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 COBLO75128 1261 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 URI1O94763 535 aaPredicted RBP17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 KIF5BP33176 963 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 GRM4Q14833 912 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 MTF1Q14872 753 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 GRIK5Q16478 980 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 UTP14CQ5TAP6 766 aaKnown RBP17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 BLIDQ8IZY5 108 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 SH3RF3Q8TEJ3 882 aaPredicted RBP17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 PANX2Q96RD6 677 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 ROBO3Q96MS0 1386 aa17.26■□□□□ 0.35
SPIRE1-201ENST00000309836 NAV1Q8NEY1 1877 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 GOLGA6L9A6NEM1 432 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 TADA3O75528 432 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 RBL2Q08999 1139 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 IGSF22Q8N9C0 903 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 PNMA1Q8ND90 353 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 KIFC2Q96AC6 838 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 SH3GLB2Q9NR46 395 aa17.25■□□□□ 0.35
SPIRE1-201ENST00000309836 SOWAHDA6NJG2 315 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 CALML3P27482 149 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 DGKHQ86XP1 1220 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 RASGRP4Q8TDF6 673 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 MRPL44Q9H9J2 332 aaKnown RBP17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 PCDHA4Q9UN74 947 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 NHSQ6T4R5 1651 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 M0R2N6 131 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 LDHBP07195 334 aaKnown RBP17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 USP5P45974 858 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 GNG11P61952 73 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 VPS72Q15906 364 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 ARHGAP29Q52LW3 1261 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 RRAGBQ5VZM2 374 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 RAD9BQ6WBX8 426 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 CARD6Q9BX69 1037 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 SRRTQ9BXP5 876 aaKnown RBP17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 MAD2L2Q9UI95 211 aa17.24■□□□□ 0.35
SPIRE1-201ENST00000309836 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 CASQ1P31415 396 aa17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 KARSQ15046 597 aaKnown RBP17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 ARL6IP4Q66PJ3 421 aaKnown RBP17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 PPFIBP1Q86W92 1011 aa17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 PYM1Q9BRP8 204 aaKnown RBP17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 GTPBP4Q9BZE4 634 aaKnown RBP17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 LIMA1Q9UHB6 759 aaKnown RBP17.23■□□□□ 0.35
SPIRE1-201ENST00000309836 MFAP3LO75121 409 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 LONP1P36776 959 aaKnown RBP17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 CLCN6P51797 869 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 KRT31Q15323 416 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 DIXDC1Q155Q3 683 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 SLC44A5Q8NCS7 719 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 MNS1Q8NEH6 495 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 WDR66Q8TBY9 1149 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 CTAGE1Q96RT6 745 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 CDC25AP30304 524 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 CPLX3Q8WVH0 158 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 GPR101Q96P66 508 aaPredicted RBP17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 ADGRG1Q9Y653 693 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
SPIRE1-201ENST00000309836 A0A0U1RQJ8 604 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 CYTH3O43739 400 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 RPN1P04843 607 aaKnown RBP17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 GYPCP04921 128 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 FECHP22830 423 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 GRAPQ13588 217 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 FILIP1LQ4L180 1135 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 KRT222Q8N1A0 295 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 DAGLBQ8NCG7 672 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 NELFBQ8WX92 580 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 ATRIPQ8WXE1 791 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 ANKIB1Q9P2G1 1089 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 MRFAP1Q9Y605 127 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 ITIH6Q6UXX5 1313 aa17.21■□□□□ 0.35
SPIRE1-201ENST00000309836 STXBP3O00186 592 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 CASP14P31944 242 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 CCT6AP40227 531 aaKnown RBP17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 NT5C2P49902 561 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 PPP4CP60510 307 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 PAK1Q13153 545 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 NFIXQ14938 502 aa17.2■□□□□ 0.34
SPIRE1-201ENST00000309836 ZNF658Q5TYW1 1059 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms