RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
PTPN2-201ENST00000309660 ST5P78524 1137 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 TRIML1Q8N9V2 468 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 MYH6P13533 1939 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 NAPAP54920 295 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 IL17AQ16552 155 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
PTPN2-201ENST00000309660 SLU7O95391 586 aaKnown RBP13.09□□□□□ -0.31
PTPN2-201ENST00000309660 GTF2IP78347 998 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 NT5DC1Q5TFE4 455 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
PTPN2-201ENST00000309660 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.31
PTPN2-201ENST00000309660 CYTH3O43739 400 aa13.08□□□□□ -0.31
PTPN2-201ENST00000309660 LETM2Q2VYF4 491 aa13.08□□□□□ -0.31
PTPN2-201ENST00000309660 PPFIBP1Q86W92 1011 aa13.08□□□□□ -0.31
PTPN2-201ENST00000309660 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.31
PTPN2-201ENST00000309660 GJD4Q96KN9 370 aaPredicted RBP13.08□□□□□ -0.31
PTPN2-201ENST00000309660 VPS16Q9H269 839 aa13.08□□□□□ -0.31
PTPN2-201ENST00000309660 ZNF18P17022 549 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 UBA7P41226 1012 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 DPYDQ12882 1025 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 DTHD1Q6ZMT9 781 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 CLEC10AQ8IUN9 316 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 IGSF22Q8N9C0 903 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 LRRN4CLQ8ND94 238 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 ANKRD7Q92527 254 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 MAD2L2Q9UI95 211 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 GDAQ9Y2T3 454 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 RASA1P20936 1047 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 CDK8P49336 464 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 GNG11P61952 73 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 MTF1Q14872 753 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 SPATA1Q5VX52 437 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 TOGARAM2Q6ZUX3 1019 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 TMEM60Q9H2L4 133 aa13.08□□□□□ -0.32
PTPN2-201ENST00000309660 FRMPD2Q68DX3 1309 aaPredicted RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 ETF1P62495 437 aaKnown RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 ERCC6LQ2NKX8 1250 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 FILIP1LQ4L180 1135 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 GSDMAQ96QA5 445 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 LTBP4Q8N2S1 1624 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 N4BP3O15049 544 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 ARHGAP6O43182 974 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 PDS5AQ29RF7 1337 aaKnown RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 G3V3G9 751 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 GYS1P13807 737 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 GNAQP50148 359 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
PTPN2-201ENST00000309660 TC2NQ8N9U0 490 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 LZTFL1Q9NQ48 299 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 TAB2Q9NYJ8 693 aa13.07□□□□□ -0.32
PTPN2-201ENST00000309660 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
PTPN2-201ENST00000309660 TRIM37O94972 964 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
PTPN2-201ENST00000309660 GRM4Q14833 912 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 CEP95Q96GE4 821 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
PTPN2-201ENST00000309660 MTRQ99707 1265 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 MXD3Q9BW11 206 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 ZNF287Q9HBT7 754 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 POLLQ9UGP5 575 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 LAMB2P55268 1798 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 SOWAHDA6NJG2 315 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 CCP110O43303 1012 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
PTPN2-201ENST00000309660 RBL2Q08999 1139 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
PTPN2-201ENST00000309660 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 SPATA20Q8TB22 786 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 SEC63Q9UGP8 760 aaKnown RBP13.06□□□□□ -0.32
PTPN2-201ENST00000309660 AFF2P51816 1311 aa13.06□□□□□ -0.32
PTPN2-201ENST00000309660 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 TRAPPC10P48553 1259 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 SCNN1DP51172 638 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 UIMC1Q96RL1 719 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 PCDHA6Q9UN73 950 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 PCDHA8Q9Y5H6 950 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 FLT1P17948 1338 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 RREB1Q92766 1687 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 TRIM49BA6NDI0 452 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
PTPN2-201ENST00000309660 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
PTPN2-201ENST00000309660 SH3RF1Q7Z6J0 888 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms