RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 RNF26Q9BY78 433 aaPredicted RBP11□□□□□ -0.65
TMOD3-201ENST00000308580 PYCARDQ9ULZ3 195 aa11□□□□□ -0.65
TMOD3-201ENST00000308580 FLOT1O75955 427 aa11□□□□□ -0.65
TMOD3-201ENST00000308580 TRAF3IP1Q8TDR0 691 aaPredicted RBP11□□□□□ -0.65
TMOD3-201ENST00000308580 CSRNP2Q9H175 543 aa11□□□□□ -0.65
TMOD3-201ENST00000308580 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11□□□□□ -0.65
TMOD3-201ENST00000308580 HECW2Q9P2P5 1572 aa11□□□□□ -0.65
TMOD3-201ENST00000308580 H7C1W4 665 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 STX10O60499 249 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 GAS7O60861 476 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 SPATA1Q5VX52 437 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 FAM170AA1A519 330 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 ZBED4O75132 1171 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 HPDP32754 393 aaPredicted RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 TICAM2Q86XR7 235 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 ZNF215Q9UL58 517 aaPredicted RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 PCP11498 1178 aaKnown RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 FAM182BQ5T319 152 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 TTC14Q96N46 770 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 ZCCHC11Q5TAX3 1644 aaKnown RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 C11orf57Q6ZUT1 292 aaPredicted RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 RASGRP4Q8TDF6 673 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 GINS2Q9Y248 185 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 PPP2R2CQ9Y2T4 447 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 DKC1O60832 514 aaKnown RBP eCLIP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 CALRP27797 417 aaKnown RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 STRN3Q13033 797 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 NR5A1Q13285 461 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 ERCC6LQ2NKX8 1250 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 CCDC121Q6ZUS5 278 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 ZNF354CQ86Y25 554 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 OTUD6BQ8N6M0 293 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 CHURC1Q8WUH1 139 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 PDE6BP35913 854 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 FOXP1Q9H334 677 aaPredicted RBP10.99□□□□□ -0.65
TMOD3-201ENST00000308580 SLC39A2Q9NP94 309 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 AXIN2Q9Y2T1 843 aa10.99□□□□□ -0.65
TMOD3-201ENST00000308580 ARHGAP44Q17R89 818 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 NIM1KQ8IY84 436 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 MICALL1Q8N3F8 863 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 ANKS4BQ8N8V4 417 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 KIF1BO60333 1816 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 H7C1D1 291 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 FMNL1O95466 1100 aaPredicted RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 RPN1P04843 607 aaKnown RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 DNM2P50570 870 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 IPO4Q8TEX9 1081 aaKnown RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 PSMD1Q99460 953 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 PIH1D3Q9NQM4 214 aaKnown RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 ICA1Q05084 483 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 GALNT17Q6IS24 598 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 AIFM3Q96NN9 605 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 ARHGAP31Q2M1Z3 1444 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 SEMA3EO15041 775 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 RPS6KA1Q15418 735 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 GDAP1L1Q96MZ0 367 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 ZSWIM5Q9P217 1185 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 XDHP47989 1333 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 KDM3AQ9Y4C1 1321 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 ZBTB16Q05516 673 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 RASGRF1Q13972 1273 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 C6orf163Q5TEZ5 329 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 IFT20Q8IY31 132 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 ACTN4O43707 911 aaKnown RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 COBLO75128 1261 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 SH2B2O14492 632 aaPredicted RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 PPP6R2O75170 966 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 TRPC3Q13507 836 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 SLFN13Q68D06 897 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 CCDC63Q8NA47 563 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 AFAP1L1Q8TED9 768 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 LSM14BQ9BX40 385 aaKnown RBP10.98□□□□□ -0.65
TMOD3-201ENST00000308580 SAR1BQ9Y6B6 198 aa10.98□□□□□ -0.65
TMOD3-201ENST00000308580 TET3O43151 1660 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 IFNAR1P17181 557 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 LONP1P36776 959 aaKnown RBP10.97□□□□□ -0.65
TMOD3-201ENST00000308580 FAM196AQ6ZSG2 479 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 SND1Q7KZF4 910 aaKnown RBP eCLIP10.97□□□□□ -0.65
TMOD3-201ENST00000308580 CYP2D7A0A087X1C5 515 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 NOP56O00567 594 aaKnown RBP10.97□□□□□ -0.65
TMOD3-201ENST00000308580 XRCC5P13010 732 aaKnown RBP10.97□□□□□ -0.65
TMOD3-201ENST00000308580 PEX26Q7Z412 305 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 UBL4BQ8N7F7 174 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 NUCKS1Q9H1E3 243 aaKnown RBP10.97□□□□□ -0.65
TMOD3-201ENST00000308580 PCDHA1Q9Y5I3 950 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 ERVV-1B6SEH8 477 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 PLEKHA4Q9H4M7 779 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
TMOD3-201ENST00000308580 CYP2J2P51589 502 aa10.97□□□□□ -0.65
TMOD3-201ENST00000308580 CFAP221Q4G0U5 840 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms