RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ISM2Q6H9L7 571 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 CCDC117Q8IWD4 279 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 MACROD2A1Z1Q3 448 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 GOLGA8AA7E2F4 631 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 I3L4J1 428 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ATP5JP18859 108 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 TYRO3Q06418 890 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 CPLX4Q7Z7G2 160 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 MAP7D3Q8IWC1 876 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 MSL3Q8N5Y2 521 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 PHF8Q9UPP1 1060 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 SYNGAP1Q96PV0 1343 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 DHTKD1Q96HY7 919 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 SPECC1L-ADORA2AF8WAN1 911 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 SGSM2O43147 1006 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 RAD21O60216 631 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 IL2RBP14784 551 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 RPS6KB1P23443 525 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ARHGEF18Q6ZSZ5 1173 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 NRKQ7Z2Y5 1582 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 FAM9CQ8IZT9 166 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ACTR5Q9H9F9 607 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 CABP2Q9NPB3 220 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ANGPTL3Q9Y5C1 460 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 SAR1BQ9Y6B6 198 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 DISP3Q9P2K9 1392 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 PLIN1O60240 522 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 MLECQ14165 292 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 TMEM132AQ24JP5 1023 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 MUTP22033 750 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 LIFRP42702 1097 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 DENND2CQ68D51 928 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 EIF1ADQ8N9N8 165 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 SIKE1Q9BRV8 207 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 METTL22Q9BUU2 404 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 TMEM206Q9H813 350 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 FOXR2Q6PJQ5 311 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 PPP4R1Q8TF05 950 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 NECTIN2Q92692 538 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 MAK16Q9BXY0 300 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 PRDM16Q9HAZ2 1276 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 WWC3Q9ULE0 1092 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 TRMT2AQ8IZ69 625 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 RIBC1Q8N443 379 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 LPIN2Q92539 896 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 MON2Q7Z3U7 1717 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 KIDINS220Q9ULH0 1771 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ANO9A1A5B4 782 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 CIB2O75838 187 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 RASA3Q14644 834 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 TAF11Q15544 211 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 EFCC1Q9HA90 598 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 UBN2Q6ZU65 1347 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 POLR3DP05423 398 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 FSIP1Q8NA03 581 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 GTF3C2Q8WUA4 911 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 ZNF512BQ96KM6 892 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 DDX23Q9BUQ8 820 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 MRPL47Q9HD33 250 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 KLHL14Q9P2G3 628 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 NRXN1Q9ULB1 1477 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 TARSL2A2RTX5 802 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 MAFGO15525 162 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 XRCC6P12956 609 aaKnown RBP eCLIP4.43□□□□□ -1.7
USH2A-201ENST00000307340 ASPRV1Q53RT3 343 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 MIF4GDA9UHW6 222 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 TOM1O60784 492 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ACBD5Q5T8D3 534 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 PRPF40BQ6NWY9 871 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 SETDB2Q96T68 719 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 NAPGQ99747 312 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 PNPLA6Q8IY17 1366 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 TMEM2Q9UHN6 1383 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 AP3M2P53677 418 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 C8orf74Q6P047 294 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 KCNV1Q6PIU1 500 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ARHGAP18Q8N392 663 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 CDKL2Q92772 493 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ATP8A2Q9NTI2 1148 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 KIAA1468Q9P260 1216 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 SNAPC5O75971 98 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 BRD2P25440 801 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 SERPINB4P48594 390 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 GNPTABQ3T906 1256 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 TEDDM1Q5T9Z0 273 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ARHGEF25Q86VW2 580 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ALKBH8Q96BT7 664 aaKnown RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 OLFML3Q9NRN5 406 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 CTTNBP2NLQ9P2B4 639 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 ZHX2Q9Y6X8 837 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 CRB1P82279 1406 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 CETN3O15182 167 aa4.43□□□□□ -1.7
USH2A-201ENST00000307340 NONOQ15233 471 aaKnown RBP eCLIP4.43□□□□□ -1.7
USH2A-201ENST00000307340 FRMD8P1Q9BZ68 369 aaPredicted RBP4.43□□□□□ -1.7
USH2A-201ENST00000307340 MEIS1O00470 390 aa4.42□□□□□ -1.7
USH2A-201ENST00000307340 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.42□□□□□ -1.7
USH2A-201ENST00000307340 FBXW7Q969H0 707 aa4.42□□□□□ -1.7
USH2A-201ENST00000307340 PBKQ96KB5 322 aa4.42□□□□□ -1.7
USH2A-201ENST00000307340 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.42□□□□□ -1.7
USH2A-201ENST00000307340 SPATA31D1Q6ZQQ2 1576 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms