RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 FAM184BQ9ULE4 1060 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 TBX22Q9Y458 520 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 PLEKHG3A1L390 1219 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 HIP1RO75146 1068 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 GAS8O95995 478 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 MYOCDQ8IZQ8 938 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 EFCC1Q9HA90 598 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 TBC1D7Q9P0N9 293 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 STK38LQ9Y2H1 464 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 BUB1O43683 1085 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 CYP21A2P08686 494 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 SMTNP53814 917 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 IFNL3Q8IZI9 196 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 BLIDQ8IZY5 108 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 SYMPKQ92797 1274 aaKnown RBP14.19□□□□□ -0.14
COL3A1-201ENST00000304636 MRRFQ96E11 262 aaKnown RBP14.19□□□□□ -0.14
COL3A1-201ENST00000304636 EXOC7Q9UPT5 735 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 RESTQ13127 1097 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 MIPOL1Q8TD10 442 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 ZSCAN10Q96SZ4 725 aaPredicted RBP14.18□□□□□ -0.14
COL3A1-201ENST00000304636 COPRSQ9NQ92 184 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
COL3A1-201ENST00000304636 PTCH1Q13635 1447 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 EIF4G3O43432 1585 aaKnown RBP14.18□□□□□ -0.14
COL3A1-201ENST00000304636 LONP1P36776 959 aaKnown RBP14.18□□□□□ -0.14
COL3A1-201ENST00000304636 BIRC3Q13489 604 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
COL3A1-201ENST00000304636 GCKP35557 465 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 GOLGA8FQ08AF8 430 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 GOLGA8DPQ0D2H9 430 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 NCAPH2Q6IBW4 605 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 REXO1Q8N1G1 1221 aaKnown RBP14.18□□□□□ -0.14
COL3A1-201ENST00000304636 ZBTB21Q9ULJ3 1066 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 KDM3AQ9Y4C1 1321 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 STAT1P42224 750 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 RAB3IL1Q8TBN0 382 aa14.18□□□□□ -0.14
COL3A1-201ENST00000304636 HNRNPH2P55795 449 aaKnown RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 GUCY2DQ02846 1103 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 ANKRD20A3Q5VUR7 823 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 ANKRD42Q8N9B4 389 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 U2AF1L4Q8WU68 220 aaKnown RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 ZNF496Q96IT1 587 aaPredicted RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 EEF1GP26641 437 aaKnown RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 ZMYM1Q5SVZ6 1142 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 RETREG2Q8NC44 543 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 ENOX1Q8TC92 643 aaKnown RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 MGARPQ8TDB4 240 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 PRDM15P57071 1507 aaPredicted RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 I3L4J1 428 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 A1BGP04217 495 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 P3H4Q92791 437 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 MAGEF1Q9HAY2 307 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 JAG2Q9Y219 1238 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 CCDC169A6NNP5 214 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 KIF3CO14782 793 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 LARGE1O95461 756 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 XRCC5P13010 732 aaKnown RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 LGSNQ5TDP6 509 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 CABLES1Q8TDN4 633 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 ACSBG1Q96GR2 724 aa14.17□□□□□ -0.14
COL3A1-201ENST00000304636 MRPL44Q9H9J2 332 aaKnown RBP14.17□□□□□ -0.14
COL3A1-201ENST00000304636 ENC1O14682 589 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 LUC7L3O95232 432 aaKnown RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 GCNT3O95395 438 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 TROVE2P10155 538 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 PANX2Q96RD6 677 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 TACO1Q9BSH4 297 aaKnown RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 ARHGEF35A5YM69 484 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 EXOC3O60645 756 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 SF3A3Q12874 501 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 GALNT17Q6IS24 598 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 HSPA1LP34931 641 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 KIF23Q02241 960 aaPredicted RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 CMTR1Q8N1G2 835 aaKnown RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 ARPP21Q9UBL0 812 aaPredicted RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 PABPN1LA6NDY0 278 aaKnown RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 MUM1Q2TAK8 710 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 ZNF589Q86UQ0 364 aaPredicted RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 ZNF622Q969S3 477 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 ZC3H12CQ9C0D7 883 aaKnown RBP14.16□□□□□ -0.14
COL3A1-201ENST00000304636 GPR108Q9NPR9 543 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 CHMP2AO43633 222 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 KCTD16Q68DU8 428 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 DPH6Q7L8W6 267 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 CCDC170Q8IYT3 715 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 MYCT1Q8N699 235 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 MAN1B1Q9UKM7 699 aa14.16□□□□□ -0.14
COL3A1-201ENST00000304636 TFAP4Q01664 338 aa14.15□□□□□ -0.14
COL3A1-201ENST00000304636 PTGDRQ13258 359 aa14.15□□□□□ -0.14
COL3A1-201ENST00000304636 CASP8Q14790 479 aa14.15□□□□□ -0.14
COL3A1-201ENST00000304636 TTC19Q6DKK2 380 aaPredicted RBP14.15□□□□□ -0.14
COL3A1-201ENST00000304636 TUBGCP2Q9BSJ2 902 aa14.15□□□□□ -0.14
COL3A1-201ENST00000304636 SSX2IPQ9Y2D8 614 aa14.15□□□□□ -0.14
COL3A1-201ENST00000304636 SMCO2A6NFE2 343 aa14.15□□□□□ -0.14
COL3A1-201ENST00000304636 SCG2P13521 617 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms