RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
RAB40A-201ENST00000304236 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.18
RAB40A-201ENST00000304236 MKRN1Q9UHC7 482 aaKnown RBP16.2■□□□□ 0.18
RAB40A-201ENST00000304236 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
RAB40A-201ENST00000304236 COL4A5P29400 1685 aa16.2■□□□□ 0.18
RAB40A-201ENST00000304236 MYH13Q9UKX3 1938 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 TMEM88BA6NKF7 163 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
RAB40A-201ENST00000304236 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
RAB40A-201ENST00000304236 FUT2Q10981 343 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 PKN1Q16512 942 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 CTR9Q6PD62 1173 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 CMTR1Q8N1G2 835 aaKnown RBP16.19■□□□□ 0.18
RAB40A-201ENST00000304236 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
RAB40A-201ENST00000304236 ATP8A2Q9NTI2 1148 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 SERTAD1Q9UHV2 236 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 MAN1B1Q9UKM7 699 aa16.19■□□□□ 0.18
RAB40A-201ENST00000304236 ATP1A3P13637 1013 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 HIBADHP31937 336 aaKnown RBP16.18■□□□□ 0.18
RAB40A-201ENST00000304236 TROAPQ12815 778 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 CFAP100Q494V2 611 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 MAP1SQ66K74 1059 aaPredicted RBP16.18■□□□□ 0.18
RAB40A-201ENST00000304236 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 ENOX1Q8TC92 643 aaKnown RBP16.18■□□□□ 0.18
RAB40A-201ENST00000304236 OXER1Q8TDS5 423 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 ZNF592Q92610 1267 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 FERMT2Q96AC1 680 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
RAB40A-201ENST00000304236 TAF1P21675 1872 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 HSPA1AP0DMV8 641 aaKnown RBP16.18■□□□□ 0.18
RAB40A-201ENST00000304236 HSPA1BP0DMV9 641 aaKnown RBP16.18■□□□□ 0.18
RAB40A-201ENST00000304236 SCNN1DP51172 638 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 MORC3Q14149 939 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 SBK1Q52WX2 424 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 TMTC3Q6ZXV5 915 aa16.18■□□□□ 0.18
RAB40A-201ENST00000304236 TRMT1Q9NXH9 659 aaKnown RBP16.18■□□□□ 0.18
RAB40A-201ENST00000304236 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 USP17L21D6R901 530 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 EPS15P42566 896 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 E4F1Q66K89 784 aaPredicted RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 SPTY2D1Q68D10 685 aaPredicted RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 CTCFLQ8NI51 663 aaPredicted RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 FANCLQ9NW38 375 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 VPS54Q9P1Q0 977 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 ARPP21Q9UBL0 812 aaPredicted RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 MAST2Q6P0Q8 1798 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 LAMB1P07942 1786 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 ACTN4O43707 911 aaKnown RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 TOP1P11387 765 aaKnown RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 MECOMQ03112 1051 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 GRIN1Q05586 938 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 NCBP1Q09161 790 aaKnown RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 USP50Q70EL3 339 aaPredicted RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 ZNF384Q8TF68 577 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 CSRNP2Q9H175 543 aa16.17■□□□□ 0.18
RAB40A-201ENST00000304236 V9GY48 417 aaPredicted RBP16.17■□□□□ 0.18
RAB40A-201ENST00000304236 CNTNAP1P78357 1384 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 FOXN1O15353 648 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 BMP6P22004 513 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 ERCC5P28715 1186 aaPredicted RBP16.16■□□□□ 0.18
RAB40A-201ENST00000304236 CXCL9Q07325 125 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 PDE4BQ07343 736 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 COL13A1Q5TAT6 717 aaPredicted RBP16.16■□□□□ 0.18
RAB40A-201ENST00000304236 FCHSD1Q86WN1 690 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 SPATA20Q8TB22 786 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 PPP1R13BQ96KQ4 1090 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 DCP1AQ9NPI6 582 aaPredicted RBP16.16■□□□□ 0.18
RAB40A-201ENST00000304236 ADAMTSL1Q8N6G6 1762 aa16.16■□□□□ 0.18
RAB40A-201ENST00000304236 CYP2D7A0A087X1C5 515 aa16.15■□□□□ 0.18
RAB40A-201ENST00000304236 PLEKHA8P1O95397 391 aa16.15■□□□□ 0.18
RAB40A-201ENST00000304236 ATP2B1P20020 1258 aa16.15■□□□□ 0.18
RAB40A-201ENST00000304236 DPF2Q92785 391 aa16.15■□□□□ 0.18
RAB40A-201ENST00000304236 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
RAB40A-201ENST00000304236 TMX1Q9H3N1 280 aa16.15■□□□□ 0.18
RAB40A-201ENST00000304236 CGNQ9P2M7 1197 aaKnown RBP16.15■□□□□ 0.18
RAB40A-201ENST00000304236 WTIPA6NIX2 430 aaPredicted RBP16.15■□□□□ 0.18
RAB40A-201ENST00000304236 TRAPPC10P48553 1259 aa16.15■□□□□ 0.18
RAB40A-201ENST00000304236 CIAPIN1Q6FI81 312 aa16.15■□□□□ 0.18
RAB40A-201ENST00000304236 PRDM1O75626 825 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 SLFN14P0C7P3 912 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 ZNF18P17022 549 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
RAB40A-201ENST00000304236 PLCD1P51178 756 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 TNIP1Q15025 636 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 SHISA4Q96DD7 197 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 GPRC5DQ9NZD1 345 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 CNTNAP5Q8WYK1 1306 aa16.14■□□□□ 0.17
RAB40A-201ENST00000304236 KIF5BP33176 963 aa16.13■□□□□ 0.17
RAB40A-201ENST00000304236 CCDC178Q5BJE1 867 aa16.13■□□□□ 0.17
RAB40A-201ENST00000304236 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
RAB40A-201ENST00000304236 ADARB2Q9NS39 739 aaKnown RBP16.13■□□□□ 0.17
RAB40A-201ENST00000304236 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
RAB40A-201ENST00000304236 SMIM22K7EJ46 135 aa16.13■□□□□ 0.17
RAB40A-201ENST00000304236 SLU7O95391 586 aaKnown RBP16.13■□□□□ 0.17
RAB40A-201ENST00000304236 TTC38Q5R3I4 469 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms