RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 SYT10Q6XYQ8 523 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 SPATA20Q8TB22 786 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 ENOX1Q8TC92 643 aaKnown RBP21.2■□□□□ 0.98
RNF139-201ENST00000303545 RBM17Q96I25 401 aaKnown RBP21.2■□□□□ 0.98
RNF139-201ENST00000303545 ZNF18P17022 549 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 CDK8P49336 464 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 DPYDQ12882 1025 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 PICALMQ13492 652 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 INF2Q27J81 1249 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 EYA3Q99504 573 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 DACH1Q9UI36 760 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 NAV1Q8NEY1 1877 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 LDHCP07864 332 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 CUL4BQ13620 913 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 SH3RF1Q7Z6J0 888 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 CREBRFQ8IUR6 639 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 MAPK8IP1Q9UQF2 711 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 SPATA31A6Q5VVP1 1343 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 TEX33O43247 280 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 PPP4CP60510 307 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 FAM177A1Q8N128 213 aaPredicted RBP21.19■□□□□ 0.98
RNF139-201ENST00000303545 TBC1D16Q8TBP0 767 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 MAP7D2Q96T17 732 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 MTRQ99707 1265 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 MXD3Q9BW11 206 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 PCDHA4Q9UN74 947 aa21.19■□□□□ 0.98
RNF139-201ENST00000303545 GTF2IP78347 998 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 KARSQ15046 597 aaKnown RBP21.18■□□□□ 0.98
RNF139-201ENST00000303545 CRY2Q49AN0 593 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 TMX1Q9H3N1 280 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 CTNND2Q9UQB3 1225 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 FLT1P17948 1338 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 CCDC194A0A1B0GVG4 234 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 BMP15O95972 392 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 ATP2B4P23634 1241 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 TRIML1Q8N9V2 468 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 TMEM60Q9H2L4 133 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 PCDHA6Q9UN73 950 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 PCDHA8Q9Y5H6 950 aa21.18■□□□□ 0.98
RNF139-201ENST00000303545 SYNRGQ9UMZ2 1314 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 KLRF2D3W0D1 207 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 NRDCO43847 1150 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 EIF6P56537 245 aaKnown RBP21.17■□□□□ 0.98
RNF139-201ENST00000303545 PPP4R3BQ5MIZ7 849 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 ZNF215Q9UL58 517 aaPredicted RBP21.17■□□□□ 0.98
RNF139-201ENST00000303545 E2F4Q16254 413 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 CLEC10AQ8IUN9 316 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 KIF18AQ8NI77 898 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 CPLX3Q8WVH0 158 aa21.17■□□□□ 0.98
RNF139-201ENST00000303545 CALML3P27482 149 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 HSPA1LP34931 641 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 PDCL2Q8N4E4 241 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 C4orf32Q8N8J7 132 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 CDK5RAP2Q96SN8 1893 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 GPR75-ASB3A0A0A6YYF3 556 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 PPP1R3GB7ZBB8 358 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 IL1R1P14778 569 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 IQUBQ8NA54 791 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 RASSF8Q8NHQ8 419 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 CERKQ8TCT0 537 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 UBA5Q9GZZ9 404 aa21.16■□□□□ 0.98
RNF139-201ENST00000303545 ROBO3Q96MS0 1386 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 STXBP3O00186 592 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 RHBDL3P58872 404 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 RRAGBQ5VZM2 374 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 PDXDC2PQ6P474 469 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 CEP95Q96GE4 821 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 CCDC34Q96HJ3 373 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 UBR3Q6ZT12 1888 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 SLURP2P0DP57 97 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 ANKRD7Q92527 254 aa21.15■□□□□ 0.98
RNF139-201ENST00000303545 FRMPD2Q68DX3 1309 aaPredicted RBP21.14■□□□□ 0.98
RNF139-201ENST00000303545 ADRA2BP18089 450 aa21.14■□□□□ 0.98
RNF139-201ENST00000303545 SPECC1LQ69YQ0 1117 aa21.14■□□□□ 0.98
RNF139-201ENST00000303545 TMEM139Q8IV31 216 aa21.14■□□□□ 0.98
RNF139-201ENST00000303545 LRRN4CLQ8ND94 238 aa21.14■□□□□ 0.98
RNF139-201ENST00000303545 ANKS1AQ92625 1134 aa21.14■□□□□ 0.98
RNF139-201ENST00000303545 SNED1Q8TER0 1413 aa21.14■□□□□ 0.98
RNF139-201ENST00000303545 PSDA5PKW4 1024 aaPredicted RBP21.14■□□□□ 0.97
RNF139-201ENST00000303545 PALM3A6NDB9 673 aaPredicted RBP21.14■□□□□ 0.97
RNF139-201ENST00000303545 TRAPPC10P48553 1259 aa21.14■□□□□ 0.97
RNF139-201ENST00000303545 C16orf86Q6ZW13 317 aa21.14■□□□□ 0.97
RNF139-201ENST00000303545 QTRT2Q9H974 415 aaKnown RBP21.14■□□□□ 0.97
RNF139-201ENST00000303545 DDX60LQ5H9U9 1706 aaKnown RBP21.13■□□□□ 0.97
RNF139-201ENST00000303545 SPDYE4A6NLX3 237 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 POLRMTO00411 1230 aaKnown RBP21.13■□□□□ 0.97
RNF139-201ENST00000303545 ERCC5P28715 1186 aaPredicted RBP21.13■□□□□ 0.97
RNF139-201ENST00000303545 CCT6AP40227 531 aaKnown RBP21.13■□□□□ 0.97
RNF139-201ENST00000303545 NAPAP54920 295 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 TBX2Q13207 712 aaPredicted RBP21.13■□□□□ 0.97
RNF139-201ENST00000303545 DOK7Q18PE1 504 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 SPATA1Q5VX52 437 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 MTERF4Q7Z6M4 381 aaKnown RBP21.13■□□□□ 0.97
RNF139-201ENST00000303545 TC2NQ8N9U0 490 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 GSDMAQ96QA5 445 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 BARHL2Q9NY43 387 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 GDAQ9Y2T3 454 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 USP17L5A8MUK1 530 aa21.13■□□□□ 0.97
RNF139-201ENST00000303545 NR1I3Q14994 352 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms