RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MYH4Q9Y623 1939 aa18.08■□□□□ 0.48
HERPUD1-201ENST00000300302 SHTN1A0MZ66 631 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 SYCE3A1L190 88 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 ICA1Q05084 483 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 NR5A1Q13285 461 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 GPATCH4Q5T3I0 446 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 JMYQ8N9B5 988 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 SHISA4Q96DD7 197 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 CNOT7Q9UIV1 285 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 TBC1D12O60347 775 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 GDF11O95390 407 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 SEPT2Q15019 361 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 SLC39A14Q15043 492 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 ADALQ6DHV7 355 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 OXER1Q8TDS5 423 aa18.07■□□□□ 0.48
HERPUD1-201ENST00000300302 ZNF543Q08ER8 600 aa18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 GALNT17Q6IS24 598 aa18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 RASGRP2Q7LDG7 609 aa18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 CCDC12Q8WUD4 166 aaPredicted RBP18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 TMEM39BQ9GZU3 492 aa18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 RIOX1Q9H6W3 641 aa18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 PCDHA7Q9UN72 937 aa18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 FRMPD2Q68DX3 1309 aaPredicted RBP18.06■□□□□ 0.48
HERPUD1-201ENST00000300302 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 PPP6R2O75170 966 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 GH2P01242 217 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 LIG1P18858 919 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 SLC35G1Q2M3R5 365 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 LRSAM1Q6UWE0 723 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 HEATR3Q7Z4Q2 680 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 BARHL2Q9NY43 387 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 NOL7Q9UMY1 257 aaKnown RBP18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 CEP131Q9UPN4 1083 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 BAZ2BQ9UIF8 2168 aaKnown RBP18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 H7C1D1 291 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 GPR162Q16538 588 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 CCDC73Q6ZRK6 1079 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 CCAR1Q8IX12 1150 aaKnown RBP18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 DCAF4Q8WV16 495 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 GPKOWQ92917 476 aaPredicted RBP eCLIP18.05■□□□□ 0.481e-6■■■■□ 19.7
HERPUD1-201ENST00000300302 SYNPO2Q9UMS6 1093 aa18.05■□□□□ 0.48
HERPUD1-201ENST00000300302 hCG_1984214I3L0E3 225 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 MRE11P49959 708 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 NPY5RQ15761 445 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 CCDC96Q2M329 555 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 WWC2Q6AWC2 1192 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 HOMER1Q86YM7 354 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 ZNF713Q8N859 430 aaPredicted RBP18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 UBA5Q9GZZ9 404 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 DACT1Q9NYF0 836 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 PCDHA4Q9UN74 947 aa18.04■□□□□ 0.48
HERPUD1-201ENST00000300302 STXBP3O00186 592 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 VEGFAP15692 232 aaPredicted RBP18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 TOB1P50616 345 aaPredicted RBP18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 RASA3Q14644 834 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 PTPAQ15257 358 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 KIF4BQ2VIQ3 1234 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 SAMD7Q7Z3H4 446 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 GAS2L3Q86XJ1 694 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 BLIDQ8IZY5 108 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 GPC2Q8N158 579 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 GMCL1P1Q8NEA9 526 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 MRPS27Q92552 414 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 NUP62CLQ9H1M0 184 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 CPVLQ9H3G5 476 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 VAT1LQ9HCJ6 419 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 GPCPD1Q9NPB8 672 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 DICER1Q9UPY3 1922 aaKnown RBP18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 SLC1A4P43007 532 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 SHROOM1Q2M3G4 852 aaPredicted RBP18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 TBC1D10BQ4KMP7 808 aaPredicted RBP18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 TNFRSF25Q93038 417 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 PIGSQ96S52 555 aa18.03■□□□□ 0.48
HERPUD1-201ENST00000300302 RAD21O60216 631 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 NR1I2O75469 434 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 EGFRP00533 1210 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 NAPAP54920 295 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 FAM160A1Q05DH4 1040 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 SIAH1Q8IUQ4 282 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 FSIP1Q8NA03 581 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 DAGLBQ8NCG7 672 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 GRPEL1Q9HAV7 217 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 ARHGEF10LQ9HCE6 1279 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 PGAP2Q9UHJ9 254 aa18.02■□□□□ 0.48
HERPUD1-201ENST00000300302 BMP15O95972 392 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 TRAPPC10P48553 1259 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 MAP3K10Q02779 954 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 RRP1BQ14684 758 aaKnown RBP18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 TNMDQ9H2S6 317 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 TRIM75PA6NK02 468 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 F5H6K3 240 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms