RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SHMT1P34896 483 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 FSTL1Q12841 308 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 IRF5Q13568 498 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 LRRFIP1Q32MZ4 808 aaKnown RBP7.05□□□□□ -1.28
SSX3-201ENST00000298396 SBK1Q52WX2 424 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 C12orf60Q5U649 245 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 GIMAP6Q6P9H5 292 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 MIGA2Q7L4E1 593 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 SLC44A5Q8NCS7 719 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 ARMC2Q8NEN0 867 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 DYNLL2Q96FJ2 89 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 POM121Q96HA1 1249 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 CSRNP1Q96S65 589 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 INCENPQ9NQS7 918 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 ATP8A2Q9NTI2 1148 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 MCM9Q9NXL9 1143 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.05□□□□□ -1.28
SSX3-201ENST00000298396 DOCK3Q8IZD9 2030 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 GNAT2P19087 354 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 INPP5BP32019 993 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 TNNI2P48788 182 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 HTRA3P83110 453 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 PRKG1Q13976 671 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 MAP3K11Q16584 847 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.04□□□□□ -1.28
SSX3-201ENST00000298396 TBC1D10CQ8IV04 446 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.04□□□□□ -1.28
SSX3-201ENST00000298396 MAP4K1Q92918 833 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 CLMNQ96JQ2 1002 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 DSCC1Q9BVC3 393 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 EHD4Q9H223 541 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 ZNF408Q9H9D4 720 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 ZNF112Q9UJU3 913 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.04□□□□□ -1.28
SSX3-201ENST00000298396 GPSM3Q9Y4H4 160 aa7.04□□□□□ -1.28
SSX3-201ENST00000298396 UBE2Q2LH0YL09 131 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 GUCY1A2P33402 732 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 TDO2P48775 406 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 HAND2P61296 217 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 PPARAQ07869 468 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 LDLRAD1Q5T700 205 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 TATDN1Q6P1N9 297 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 PDXDC2PQ6P474 469 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 STOX1Q6ZVD7 989 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 C16orf86Q6ZW13 317 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 ZSCAN29Q8IWY8 852 aaPredicted RBP7.03□□□□□ -1.28
SSX3-201ENST00000298396 RUFY2Q8WXA3 655 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 KLRG1Q96E93 195 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 DHX36Q9H2U1 1008 aaKnown RBP7.03□□□□□ -1.28
SSX3-201ENST00000298396 GBA2Q9HCG7 927 aaPredicted RBP7.03□□□□□ -1.28
SSX3-201ENST00000298396 PI4KBQ9UBF8 816 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 ARPP21Q9UBL0 812 aaPredicted RBP7.03□□□□□ -1.28
SSX3-201ENST00000298396 ANAPC4Q9UJX5 808 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 RBM8AQ9Y5S9 174 aaKnown RBP7.03□□□□□ -1.28
SSX3-201ENST00000298396 SNCAIPQ9Y6H5 919 aa7.03□□□□□ -1.28
SSX3-201ENST00000298396 NEDD4P46934 1319 aa7.02□□□□□ -1.28
SSX3-201ENST00000298396 ZSWIM8A7E2V4 1837 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 MINDY4BA8MYZ0 360 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 PRDM1O75626 825 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 RGS20O76081 388 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 GDF11O95390 407 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 APPP05067 770 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 POLR3DP05423 398 aaPredicted RBP7.02□□□□□ -1.29
SSX3-201ENST00000298396 CYP21A2P08686 494 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 FGRP09769 529 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 AKR1B1P15121 316 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 RASA1P20936 1047 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 CTHP32929 405 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 CDK8P49336 464 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 MFAP1P55081 439 aaKnown RBP7.02□□□□□ -1.29
SSX3-201ENST00000298396 C1QTNF8P60827 252 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 VGLL4Q14135 290 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 SUPT20HL1Q3ZLR7 823 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 NOL9Q5SY16 702 aaKnown RBP7.02□□□□□ -1.29
SSX3-201ENST00000298396 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 SH3RF1Q7Z6J0 888 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 SAPCD2Q86UD0 394 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 CCDC84Q86UT8 332 aaPredicted RBP7.02□□□□□ -1.29
SSX3-201ENST00000298396 STK11IPQ8N1F8 1099 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 PNMA1Q8ND90 353 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 KCNB2Q92953 911 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 ZKSCAN4Q969J2 545 aaPredicted RBP7.02□□□□□ -1.29
SSX3-201ENST00000298396 WRNIP1Q96S55 665 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 OCSTAMPQ9BR26 566 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 ZNF341Q9BYN7 854 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 NAPBQ9H115 298 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.02□□□□□ -1.29
SSX3-201ENST00000298396 GDPD2Q9HCC8 539 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 PRM3Q9NNZ6 103 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 ANO2Q9NQ90 1003 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 SERPINB13Q9UIV8 391 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 ANGEL1Q9UNK9 670 aaKnown RBP7.02□□□□□ -1.29
SSX3-201ENST00000298396 TLL2Q9Y6L7 1015 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 PLIN4Q96Q06 1357 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 MGAMO43451 1857 aa7.02□□□□□ -1.29
SSX3-201ENST00000298396 A0A0G2JMZ2 1700 aa7.01□□□□□ -1.29
SSX3-201ENST00000298396 ZNFX1Q9P2E3 1918 aaKnown RBP7.01□□□□□ -1.29
SSX3-201ENST00000298396 IGKV6D-41A0A0C4DH26 115 aa7.01□□□□□ -1.29
SSX3-201ENST00000298396 TMEM88BA6NKF7 163 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms